Job Description P21156 Confidence 99.55% Date Thu Jan 5 11:37:52 GMT 2012 Rank 29 Aligned Residues 166 % Identity 14% Template c2hmaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable trna (5-methylaminomethyl-2-thiouridylate)- PDBTitle: the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-2 methyltransferase trmu from streptococcus pneumoniae Resolution 2.41 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																										.	.	.	.																																		.	.	.
Query SS confidence																																										.	.	.	.																																		.	.	.
Query Sequence		S	N	P	V	M	L	Y	S	I	G	K	D	S	S	V	M	L	H	L	A	R	K	A	F	Y	P	G	T	L	P	F	P	L	L	H	V	D	T	G	W	.	.	.	.	K	F	R	E	M	Y	E	F	R	D	R	T	A	K	A	Y	G	C	E	L	L	V	H	K	N	P	E	G	V	A	M	G	I	.	.	.
Query Conservation																																										.	.	.	.																																		.	.	.
Alig confidence																									.	.	.	.														.	.	.	.																																		.	.	.
Template Conservation																									.	.	.	.
Template Sequence		T	R	V	V	V	G	X	S	G	G	V	D	S	S	V	T	A	L	L	L	K	E	Q	.	.	.	.	G	Y	D	V	I	G	I	F	X	K	N	W	D	D	T	D	C	T	A	T	E	D	Y	K	D	V	V	A	V	A	D	Q	I	G	I	P	Y	Y	S	V	N	F	E	K	E	Y	W	D	R	V	F	E	Y
Template Known Secondary structure		S								S	S													T	.	.	.	.	T																																	T																T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
								101	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.												.
Query SS confidence		.	.	.	.	.	.												.
Query Sequence		.	.	.	.	.	.	N	P	F	V	H	G	S	A	K	H	T	.	D	I	M	K	T	E	G	L	K	Q	A	L	N	K	Y	G	F	D	A	A	F	G	G	A	R	R	D	E	E	K	S	R	A	K	E	R	I	Y	S	F	R	D	R	F	H	R	W	D	P	K	N	Q	R	P	E	L	W	H	N	Y	N	G
Query Conservation		.	.	.	.	.	.												.
Alig confidence		.	.	.	.	.	.												.																																								.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		F	L	A	E	Y	R	A	G	R	T	P	N	P	D	V	X	C	N	K	E	I	K	F	K	A	F	L	D	Y	A	I	T	L	G	A	D	Y	V	A	T	G	H	Y	A	R	V	A	R	D	E	D	G	T	V	H	X	L	.	.	.	.	R	G	V	D	N	G	K	D	Q	T	Y	F	L	S	Q	L	S	Q	E
Template Known Secondary structure								T	T													T	T	T	T								T	T	T		S							S							S	S	S						.	.	.	.			S	S	T	T	T			G	G	G	G	T	T
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	N	K	G	E	S	I	R	V	F	P	L	S	N	W	T	E	Q	D	I	W	Q	Y	I	W	L	E	N	I	D	I
Query Conservation
Alig confidence						.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		Q	L	Q	K	.	.	.	.	T	X	F	P	L	G	H	L	E	K	P	E	V	R	R	L	A	E	E	A	G	L	S	T
Template Known Secondary structure				T	T	.	.	.	.				T	T	T	T													T	T		T	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		163	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions