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Job DescriptionP21156
Confidence99.43%DateThu Jan 5 11:37:52 GMT 2012
Rank37Aligned Residues149
% Identity14%Templatec2c5sA_
PDB info PDB header:rna-binding proteinChain: A: PDB Molecule:probable thiamine biosynthesis protein thii; PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60...... ...70.........80... ......90........ .100
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Query Sequence  SNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTG. WKFREMYEFRDRTAKAY. . . . . GCELLVHKNPEGVAM. GI
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Template Sequence  GKVMVLLSGGIDSPVAAYLTMK. . . . RGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEVQKTINK
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SSS....BT
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   178.180.........190......... 200.........210.........220.........230.........240.........250...
 
   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  NPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGES
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Template Sequence  EIPSSYSMTVMRRMMMRITERIAEERNALAITTGESLGQVASQTLDSMHTINEVT. . . . . . . . . . . . . . . . . . . . . . . NY
Template Known Secondary structure  S
GGGTT





SSSTTS

GGG
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   254.....260.........270.........280.........290.........300........ .310
 
   181........190.........200...
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Query Sequence  IRVFPLSNWTEQDIWQYIWLENI
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Template Sequence  PVIRPLITMDKLEIIKIAEEIGT
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   311........320.........330...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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