 |
Job Description | P67729 | Confidence | 3.25% | Date | Thu Jan 5 12:10:50 GMT 2012 |
Rank | 45 | Aligned Residues | 24 |
% Identity | 13% | Template | c1l6lK_ |
PDB info |
PDB header:lipid transport | Chain: K: PDB Molecule:apolipoprotein a-ii; |
PDBTitle: structures of apolipoprotein a-ii and a lipid surrogate2 complex provide insights into apolipoprotein-lipid3 interactions
|
Resolution | 2.30 Å |
|
  |   |
234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | A | G | M | V | A | V | W | C | L | P | R | L | H | A | M | M | H | Q | M | K | N | P |
Query Conservation |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|
|
|
|
|
Template Sequence |   |
S | L | V | S | Q | Y | F | Q | T | V | T | D | Y | G | K | D | L | M | E | K | V | K | S | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|