Return to main results Retrieve Phyre Job Id

Job DescriptionP67729
Confidence2.62%DateThu Jan 5 12:10:50 GMT 2012
Rank78Aligned Residues10
% Identity20%Templatec1bmxA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:human immunodeficiency virus type 1 capsid; PDBTitle: hiv-1 capsid protein major homology region peptide analog,2 nmr, 8 structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   404.....410...
Predicted Secondary structure 






Query SS confidence 









Query Sequence  MMVNRPKQQP
Query Conservation            
Alig confidence 









Template Conservation 

 






Template Sequence  YKTLRAEQAS
Template Known Secondary structure  S

Template Predicted Secondary structure 



Template SS confidence 









   22.......30.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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