Job Description P0A9R7 Confidence 97.63% Date Thu Jan 5 11:11:07 GMT 2012 Rank 116 Aligned Residues 152 % Identity 18% Template c3ldaA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad51; PDBTitle: yeast rad51 h352y filament interface mutant Resolution 2.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		M	Q	P	G	E	M	A	F	L	T	G	H	S	G	A	G	K	S	T	L	L	K	L	I	C	.	.	.	.	.	.	G	I	E	R	P	S	A	G	K	I	W	F	S	G	H	D	I	T	R	L	K	N	R	E	V	P	F	L	R	R	Q	I	G	M	I	F	Q	D	H	H	L	L	M	D	R	T	V	Y	D
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	.	G	T	F	R	P	V	R	L	V	S	I	A	Q	R	F	.	.	.	.	.	.	.	.	.	.	.	G	L	D	P	D	D
Template Known Secondary structure				T	T	S							S	T	T	S	S												T	T	S		G	G	G	T			S	S							S	S	.	S														T	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.												.	.	.	240	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		N	V	A	I	P	L	I	I	A	G	A	S	G	D	D	I	R	R	R	V	S	A	A	L	D	K	V	G	L	L	D	K	A	K	N	F	P	I	Q	L	S	G	G	E	Q	Q	R	V	G	I	A	R	A	V	V	N	K	P	A	V	L	L	A	D	E	P	T	G	N	L	D	D	A	L	S	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	G	E	L	S	A	R	Q	M	H
Template Known Secondary structure					T								S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S									T	G	G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																											.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
			174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	G	I	L	R	L	F	E	E	F	N	R	V	G	V	T	V	L	M	A	T	H	D	I	N	L	I	S	R	R	S	Y	R	M	L	T	L	S	D	G	H
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	A	K	F	M	R	A	L	Q	R	L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	V	N	I	M	A	Y	S	S	T	T	R	L	G	F	K	K	G	K
Template Known Secondary structure																																		S									S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions