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Job DescriptionP0A9R7
Confidence97.94%DateThu Jan 5 11:11:07 GMT 2012
Rank102Aligned Residues179
% Identity16%Templatec3cmvG_
PDB info PDB header:recombinationChain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures
Resolution4.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  VTFHMQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNV
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Template Sequence  GAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPI. . . . . YARKLGVDIDNLLCSQPDTGEQAL
Template Known Secondary structure  SSSSTTS
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   1052.......1060.........1070.........1080.........1090.........1100.. .......1110.........1120......
 
   101...... ..110.........120. ........130 ......
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Query Sequence  AIPLIIA. . . . . . . . . . . . . . . . . . . . . . . GASGDDIRRRVSAA. . . . . . . . . . . . . . . . . . . . LDKVGLLDK. AKNFPI
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Template Sequence  EICDALARSGAVDVIVVDSVAALTPKAEIEGLAARMMSQAMRKLAGNLKQSNTLLIFINQGGNALKFYASVRLDIRRIGA
Template Known Secondary structure  TTSS


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   1127..1130.........1140.........1150.........1160.........1170.........1180.........1190.........1200......
 
   137..140.........150..... ....160.........170.........180.........190.........200.........210
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Query Sequence  QLSGGEQQRVGIARAVVNK. . PAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTL
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Template Sequence  VKEGENVVGSETRVKVVKNKIAAPFKQAEFQI. LYGEGINFYGELVDLGVKEK. . . . LIEKAGAWY. SYKGEKIGQ
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   1231........1240.........1250.........1260.. .......1270.........1280.. .......1290. ........1300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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