Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9R7
Confidence97.78%DateThu Jan 5 11:11:07 GMT 2012
Rank107Aligned Residues147
% Identity13%Templatec2recB_
PDB info PDB header:helicasePDB COMPND:
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  MQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPL
Query Conservation 
  


  
 
 








  
 
      
 
   
  
          

  
  
 
        

 
 
    
Alig confidence 










































.....................................
Template Conservation     
 
  
 
 

 




 
         
  




 
  .....................................
Template Sequence  LPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTS



TTSSTT


SS

.....................................
Template Predicted Secondary structure 
















.....................................
Template SS confidence 















































































   56...60.........70.........80.........90........
 
   105....110.........120.........130.........140.........150.........160...... ...170.........
Predicted Secondary structure 


















.....


Query SS confidence 





























































. . . . .












Query Sequence  IIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTG. . . . . NLDDALSEGILRL
Query Conservation                   
               



  


 

 

   
 






  .....


      
   
Alig confidence  ............

















































.....












Template Conservation  ............        

 
   
        
        

      






  
    
     

     
Template Sequence  . . . . . . . . . . . . LDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGLAARMMSQA
Template Known Secondary structure  ............

TT

TTT


SST


S
TTS




Template Predicted Secondary structure  ............





















Template SS confidence 















































































   99100.........110.........120.........130.........140.........150.........160......
 
   180... ......190....... ..200.........210.........220
Predicted Secondary structure  ....




.





Query SS confidence 



. . . .













.






















Query Sequence  FEEF. . . . NRVGVTVLMATHDI. NLISRRSYRMLTLSDGHLHGGVG
Query Conservation 
   ....   
 


  

  .       
 
 

  
 
   
 
Alig confidence 



....













.






















Template Conservation     
   
      

 


 
                   
  
 
Template Sequence  MRKLAGNLKQSNTLLIFINQTGGNALKFYASVRLDIRRIGAVKEGE
Template Known Secondary structure  TTT







T
STT
Template Predicted Secondary structure 


















Template SS confidence 













































   175....180.........190.........200.........210.........220
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions