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Job DescriptionP0A9R7
Confidence98.30%DateThu Jan 5 11:11:07 GMT 2012
Rank92Aligned Residues113
% Identity24%Templatec2o8dB_
PDB info PDB header:dna binding protein/dnaChain: B: PDB Molecule:dna mismatch repair protein msh6; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g du mispair
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50 .........60.........70.........80.........90......
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Query Sequence  QPGEMAFLTGHSGAGKSTLLKLICG. . . . . . . . . IERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTV
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Template Sequence  NKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLG. . . . . . . . . . . . . . . . . . . . . . . . . .
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   1124.....1130.........1140.........1150.........1160.........1170.......
 
   97..100.........110.........120.........130.........140.........150... ......160.........170....
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Query Sequence  YDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVV. . NKPAVLLADEPTGNLDDALSE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . STFFVELSETASILMHATAHSLVLVDELGRGTATFDGT
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   1188.1190.........1200.........1210.........1220.....
 
   175....180 ...... ...190.........200......
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Query Sequence  GILRLF. EEFNRV. GVTVLMATHDINLISRRSYR
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Template Sequence  AIANAVVKELAETIKCRTLFSTHYHSLVEDYSQN
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   1226...1230.........1240.........1250.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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