Job Description P0A9R7 Confidence 100.00% Date Thu Jan 5 11:11:07 GMT 2012 Rank 28 Aligned Residues 209 % Identity 32% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		I	R	F	E	H	V	S	K	A	Y	L	G	.	G	R	Q	A	L	Q	G	V	T	F	H	M	Q	P	G	E	M	A	F	L	T	G	H	S	G	A	G	K	S	T	L	L	K	L	I	C	G	I	E	R	P	S	A	G	K	I	W	F	S	G	H	D	I	T	R	L	K	N	R	E	V	P	F	L	R	R	Q
Query Conservation														.
Alig confidence														.																																																													.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		I	D	I	D	H	V	S	F	Q	Y	N	D	N	E	A	P	I	L	K	D	I	N	L	S	I	E	K	G	E	T	V	A	F	V	G	M	S	G	G	G	K	S	T	L	I	N	L	I	P	R	F	Y	D	V	T	S	G	Q	I	L	I	D	G	H	N	I	K	D	F	L	T	G	S	.	.	.	L	R	N	Q
Template Known Secondary structure											S		S	S	S			S										T	T								S	T	T	S	S						T	T	T	T	T	S	S			S							T	T			G	G	G	S					.	.	.				T
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.				.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	M	I	F	Q	D	H	H	L	L	M	D	R	T	V	Y	D	N	V	A	I	P	L	I	I	A	G	A	S	G	D	D	I	R	R	R	V	S	A	A	L	D	K	V	G	L	L	D	K	A	K	N	F	P	I	.	.	.	.	.	.	.	.	.	.	.	Q	L	S	G	G	E	Q	Q	R	V	G	I	A
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.										.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.										.	.	.	.	.	.
Template Sequence		I	G	L	V	Q	Q	D	N	I	L	F	S	D	.	T	V	K	E	N	I	L	L	G	.	.	.	.	.	.	R	P	T	A	T	D	E	E	V	V	E	A	A	K	M	A	N	A	H	D	F	I	M	N	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	K	L	S	G	G	Q	K	Q	R	L	S	I	A
Template Known Secondary structure							S	S					S	S	.	B						G	G	G	.	.	.	.	.	.		S	S													T	T							T	S	T	T	G	G	G		B			G	G	G	T	T	S
Template Predicted Secondary structure															.										.	.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.							.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	V	N	K	P	A	V	L	L	A	D	E	P	T	G	N	L	D	D	A	L	S	E	G	I	L	R	L	F	E	E	F	N	R	V	G	V	T	V	L	M	A	T	H	D	I	N	L	I	S	R	R	S	Y	R	M	L	T	L	S	D	G	H	L	H	G	G	V	G	H	E
Query Conservation
Alig confidence																																					.																.
Template Conservation																																					.																.
Template Sequence		R	I	F	L	N	N	P	P	I	L	I	L	D	E	A	T	S	A	L	D	L	E	S	E	S	I	I	Q	E	A	L	D	V	L	S	.	K	D	R	T	T	L	I	V	A	H	R	L	S	T	I	.	T	H	A	D	K	I	V	V	I	E	N	G	H	I	V	E	T	G	T	H	R
Template Known Secondary structure									S						S	T	T	T	T																	T	.	T	T	S							S	S	G	G	G	T	.	T	T		S							T	T
Template Predicted Secondary structure																																					.																.
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions