Job Description P0A9R7 Confidence 97.61% Date Thu Jan 5 11:11:07 GMT 2012 Rank 117 Aligned Residues 145 % Identity 17% Template c2cvhB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	P	G	E	M	A	F	L	T	G	H	S	G	A	G	K	S	T	L	L	K	L	I	C	G	I	E	R	P	S	A	G	K	I	W	F	S	G	H	D	I	T	R	L	K	N	R	E	V	P	F	L	R	R	Q	I	G	M	I	F	Q	D	H	H	L	L	M	D	R	T	V	Y	D	N	V	A	I	P	L
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Sequence		F	A	P	G	V	L	T	Q	V	Y	G	P	Y	A	S	G	K	T	T	L	A	L	Q	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	S	G	K	K	V	A	Y	V	D	T	E	G	G	F	S	P	.	.	.	.	.	E	R	L	V	Q	M	A
Template Known Secondary structure		B		T	T	S							S	T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S							S	S	S					.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		I	I	A	G	A	S	G	D	D	I	R	R	R	V	S	A	A	L	D	K	V	G	L	L	D	K	A	K	N	F	P	I	Q	L	S	G	G	E	Q	Q	R	V	G	I	A	R	A	V	V	N	K	P	A	V	L	L	A	D	E	P	T	G	N	L	.	.	.	.	.	.	.	.	D	D	A	L	S	E	G	I
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	R	G	L	N	P	E	E	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	R	F	I	L	F	T	P	S	D	F	K	E	Q	R	R	V	I	G	S	L	K	K	T	V	D	S	N	F	A	L	V	V	V	D	S	I	T	A	H	Y	R	A	E	E	N	R	S	G	L	I	A	E	L	S	R	Q
Template Known Secondary structure				T	T									.	.	.	.	.	.	.	.	.	.	.	.									S	S																T	T										S		S	B	T	T	B
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.													.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		177	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.														.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure											.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	L	F	E	E	F	N	R	.	V	G	V	T	V	L	M	A	T	H	D	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	S	R	R	S	Y	R	M	L	T	L	S
Query Conservation											.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	V	L	L	W	I	A	R	K	H	N	I	P	V	I	V	I	N	Q	V	H	F	D	S	R	T	E	M	T	K	P	V	A	E	Q	T	L	G	Y	R	C	K	D	I	L	R	L	D
Template Known Secondary structure													T									S	S	S	S			S	S				S	S		S	T	T						S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions