Job Description P37744 Confidence 98.99% Date Thu Jan 5 11:57:17 GMT 2012 Rank 62 Aligned Residues 183 % Identity 18% Template d1vm8a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases UDP-glucose pyrophosphorylase Resolution 2.50

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	M	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	Y	.	.	.	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	.	.	.	.	.	.	.	.	.	.	.	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L
Query Conservation																																	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.														.	.	.												.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.														.	.	.
Template Sequence		K	V	A	.	V	L	L	L	A	G	G	Q	G	T	R	L	G	.	.	.	V	S	Y	P	K	G	X	Y	D	V	G	L	P	S	H	K	T	L	F	Q	I	Q	A	E	R	I	L	K	L	Q	Q	L	A	E	K	H	H	G	N	K	C	T	I	P	W	Y	I	X	T	S	G	R	T	X	E	S	T	K	E	F
Template Known Secondary structure					.							S	B		T	T	T	T	.	.	.		S	S	B	G	G	G		B				T	T			B																					S	S												T	T	T
Template Predicted Secondary structure					.														.	.	.
Template SS confidence
		102	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.																						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure												.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		L	G	D	G	S	Q	W	G	L	N	.	.	.	L	Q	Y	K	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	.	.	.	.	.	.	.	.	I	G	G	D	D	C	A	L	V	L	G	D	N	I	F	Y
Query Conservation												.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence												.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	K	H	K	F	F	G	L	K	K	E	N	V	V	F	F	Q	Q	G	X	L	P	A	X	S	F	D	G	K	I	I	L	E	E	K	N	K	V	S	X	A	P	D	G	N	G	G	L	Y	R	A	L	A	A	Q	N	I	V	E	D	X	E	Q	R	G	I	C	S	I	H	V	Y	C	V	D	N	I	L	V
Template Known Secondary structure					T	G	G	G	G	S		G	G	G														T	T	S		B					T	T									T	T									T	T									T									T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.														.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	K	N	G	T	A	I	S	L	E	E	K	P	L	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	D
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		K	V	A	D	P	R	F	I	G	F	C	I	Q	K	G	A	D	C	G	A	K	V	V	E	K	T	N	P	T	E	P	V	G	V	V	C	R	V	D	G	V	.	Y	Q	V	V	E	Y	S	E	I	S	L	A	T	A	Q	R	R	S	S	D	G	R	L	L	F	N	A	G	N	I	A	N	H	F	F	T	V	P
Template Known Secondary structure			T	T											T	T		S										S	T	T										T	T		.						T	T	T	S								B		T	T	S	S	B	S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		183	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Q	M	A	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	K	D	V	V	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions