Job Description P37744 Confidence 100.00% Date Thu Jan 5 11:57:17 GMT 2012 Rank 30 Aligned Residues 222 % Identity 19% Template d1jyka_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	M	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	Q	Y
Query Conservation
Alig confidence					.																																																									.								.	.	.
Template Conservation					.																																																									.								.	.	.
Template Sequence		I	R	V	.	K	A	I	I	L	A	A	G	L	G	T	R	L	R	P	L	T	E	N	T	P	K	A	L	V	Q	V	N	Q	K	P	L	I	E	Y	Q	I	E	F	L	K	E	K	G	I	N	D	I	I	I	I	V	G	Y	L	K	.	E	Q	F	D	Y	L	K	.	.	.	E	K	Y	G	V	R	L	V	F
Template Known Secondary structure					.								S			G	G	G	T	T	T	T	S	S	S		G	G	G				T	T														T	T										T	T	G	.	G	G	G	T				.	.	.
Template Predicted Secondary structure					.																																																									.								.	.	.
Template SS confidence
		4	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	G	G	D	D	C	A	L	V	L	G	D	N	I	F	Y	G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	K	N	G	T	A	I	S	L
Query Conservation
Alig confidence																						.	.																						.	.	.	.	.	.	.
Template Conservation																						.	.																						.	.	.	.	.	.	.
Template Sequence		N	D	K	Y	A	D	Y	N	N	F	Y	S	L	Y	L	V	K	E	E	L	.	.	A	N	S	Y	V	I	D	A	D	N	Y	L	F	K	N	X	F	R	N	D	L	.	.	.	.	.	.	.	T	R	S	T	Y	F	S	V	Y	R	E	D	C	T	N	E	W	F	L	V	Y	G	D	D	Y	K	V	Q	D	I
Template Known Secondary structure			T	T	T	T	T	S		T						T	T	G	G	G		.	.	T	T						T	T				S	S					S			.	.	.	.	.	.	.		S									S	S		S	S								T	T		B
Template Predicted Secondary structure																						.	.																						.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		E	E	K	P	L	E	P	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	D	V	V	Q	M	A	K	N	L	.	.	.	.	.	K	P	S	A	R	G	E	L	E	I	T	D	I	N	R	I	Y	L	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I	E
Query Conservation																																.	.	.	.	.
Alig confidence					.	.	.																									.	.	.	.	.																			.
Template Conservation					.	.	.																																																.
Template Sequence		I	V	D	.	.	.	S	K	A	G	R	I	L	S	G	V	S	F	W	D	A	P	T	A	E	K	I	V	S	F	I	D	K	A	Y	V	S	G	E	F	V	D	L	Y	W	D	N	X	V	K	D	N	I	.	K	E	L	D	V	Y	V	E	E	L	E	G	N	S	I	Y	E	I	D	S	V	Q	D	Y	R	K
Template Known Secondary structure					.	.	.		S	S			B			S																					T	T	T			T	T			T	T					T	T	G	.	G	G										T	T	S						S
Template Predicted Secondary structure					.	.	.																																																.
Template SS confidence
		150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		236	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	N	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions