Return to main results Retrieve Phyre Job Id

Job DescriptionP37744
Confidence100.00%DateThu Jan 5 11:57:17 GMT 2012
Rank4Aligned Residues289
% Identity92%Templated1iina_
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  MKMRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQY
Query Conservation 


 







 



 


   

 



 




   
  
   

  
 

        
   
            
Alig confidence 















































































Template Conservation 

 








 



 


   

 

 
 




   
  
   
   



        
                
Template Sequence  MKTRKGIILAGGSGTRLYPVTMAVSQQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQY
Template Known Secondary structure 





S

GGGTTTTSSS
GGGSTTTTTT


TTTTTSGGGT
Template Predicted Secondary structure 




































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  KVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDKNGTAISL
Query Conservation         


 

  
          

   
                     

           
 
  
  
 
   
Alig confidence 















































































Template Conservation         

  

  
          
   
                       
                     
   
Template Sequence  KVQPSPDGLAQAFIIGEEFIGHDDCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDQKGTAVSL
Template Known Secondary structure 
SS


TTTTTS
TT
TT
SSS
S
GGGS
SSS
Template Predicted Secondary structure 


































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  EEKPLEPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINRIYLEQGRLSVAMMGRGYAWLDTGTHQSLIEASNFI
Query Conservation   


          


      
  
         
    
    
   
            
 



  

  
    
Alig confidence 















































































Template Conservation   


          


      
  
         
    
    

               
 

 
      
    
Template Sequence  EEKPLQPKSNYAVTGLYFYDNSVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMMGRGYAWLDTGTHQSLIEASNFI
Template Known Secondary structure  S
SS
S
S
TT



TTSS

TT

TT

SS
Template Predicted Secondary structure 

























Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   241........250.........260.........270.........280.........
Predicted Secondary structure 






















Query SS confidence 
















































Query Sequence  ATIEERQGLKVSCPEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMT
Query Conservation                         
                 
 
     
Alig confidence 
















































Template Conservation                         
    

              
    
Template Sequence  ATIEERQGLKVSCPEEIAFRKNFINAQQVIELAGPLSKNDYGKYLLKMV
Template Known Secondary structure  T

SS
TTSS
GGGTTS
Template Predicted Secondary structure 




















Template SS confidence 
















































   241........250.........260.........270.........280.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions