Job Description P37744 Confidence 16.92% Date Thu Jan 5 11:57:17 GMT 2012 Rank 92 Aligned Residues 85 % Identity 11% Template c3zq4C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ribonuclease j 1; PDBTitle: unusual, dual endo- and exo-nuclease activity in the degradosome2 explained by crystal structure analysis of rnase j1 Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure													.																		.	.
Query SS confidence													.																		.	.
Query Sequence		V	S	K	Q	L	L	P	I	Y	D	K	.	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	D	.	.	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	Q	Y	K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I
Query Conservation													.																		.	.
Alig confidence													.																		.	.
Template Conservation
Template Sequence		K	P	K	F	F	M	P	I	H	G	E	Y	R	M	Q	K	M	H	V	K	L	A	T	D	C	G	I	P	E	E	N	C	F	I	M	D	N	G	E	V	L	A	L	K	G	D	E	A	S	V	A	G	K	I	P	S	G	S	V	Y	I	D	G	S	G	I	G	D	I	G	N	I	V	L	R	D	R	R	I	L
Template Known Secondary structure										S	B															T	T			G	G	G	B					T	T							T	T																	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		101	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	D	C	A	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	E	G	L	V	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions