Job Description P37744 Confidence 99.67% Date Thu Jan 5 11:57:17 GMT 2012 Rank 59 Aligned Residues 190 % Identity 17% Template c3okrC_ PDB info PDB header:transferase Chain: C: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd) Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		K	M	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	.	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	Q	Y
Query Conservation																																																	.
Alig confidence					.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																															.	.
Template Conservation					.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Template Sequence		E	V	V	.	A	I	V	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	F	Y	Q	L	D	G	Q	T	L	I	E	R	A	V	D	G	L	L	D	S	G	V	V	D	T	V	V	V	A	V	P	A	D	R	T	D	E	A	R	Q	I	L	G	H	R	A	M	I	V	A	G	V	.	.
Template Known Secondary structure					.						.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T				T	T														T	S											S	S	S								S		S	S	S							.	.
Template Predicted Secondary structure					.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Template SS confidence
		7	.	.		10	.	.	.	.															.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	G	G	D	D	C	A	L	V	L	G	D	N	I	.	.	F	Y	G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	K	N	G	T	A	I
Query Conservation																																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.																									.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	A	L	T	V	L	S	E	P	E	F	V	L	V	H	D	A	A	R	A	L	T	P	P	A	L	V	A	R	V	V	E	A	L	R	D	G	Y	A	A	V	V	P	V	L	.	.	.	.	.	P	L	S	D	T	I	K	A	V	D	A	N	G	V	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.						S					S							T	T		T	T														T	T	T		S							.	.	.	.	.			S	S							T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.
Template SS confidence
															88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	E	K	P	L	E	P	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	D	V	V	Q	M	A	K	N	L	K	P	S	A	R	G	E	L	E	I	T	D	I	N	R	I	Y	L	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I	E	A	S	N
Query Conservation
Alig confidence							.	.	.	.																					.	.	.	.	.	.	.	.	.	.																										.
Template Conservation							.	.	.	.																					.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		G	T	P	E	R	.	.	.	.	A	G	L	R	A	V	Q	T	P	Q	G	F	T	T	D	L	L	L	R	S	.	.	.	.	.	.	.	.	.	.	Y	Q	Y	T	D	D	A	S	L	V	E	H	I	G	G	Q	V	Q	V	V	D	G	D	P	L	.	A	F	K	I	T	T	K	L	D	L	L	L	A	Q	A
Template Known Secondary structure						S	.	.	.	.	S							S													.	.	.	.	.	.	.	.	.	.						S								T										G	G	.	G					S
Template Predicted Secondary structure							.	.	.	.																					.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		153	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.											.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		239	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	R
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		228	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions