Job Description P37744 Confidence 98.95% Date Thu Jan 5 11:57:17 GMT 2012 Rank 63 Aligned Residues 185 % Identity 17% Template c3oc9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of putative udp-n-acetylglucosamine2 pyrophosphorylase from entamoeba histolytica Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	M	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	Y	.	.	.	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q
Query Conservation																																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.														.	.	.												.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.														.	.	.
Template Sequence		K	T	A	.	L	I	T	P	A	G	G	Q	G	S	R	L	G	.	.	.	F	E	H	P	K	G	M	F	V	L	P	F	E	I	P	K	S	I	F	Q	M	T	S	E	R	L	L	R	L	Q	E	L	A	S	E	Y	S	H	Q	K	N	V	M	I	H	W	F	L	M	T	N	E	E	T	I	E	E	I	N	N
Template Known Secondary structure					.							S	B		T	T	T	T	.	.	.			S	B	G	G	G					S	S	S																										S												T	T	T
Template Predicted Secondary structure					.														.	.	.
Template SS confidence
		31	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.																						.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure													.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Query SS confidence													.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Query Sequence		L	L	G	D	G	S	Q	W	G	L	N	.	.	.	L	Q	Y	K	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	P	D	G	L	A	Q	.	.	.	.	.	.	.	.	A	F	I	I	G	E	E	F	I	G	G	D	D	C	A	L	V	L	G	D	N	I	F
Query Conservation													.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Alig confidence													.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	K	E	H	Q	Y	F	G	L	S	S	E	Q	I	H	C	F	P	Q	G	M	L	P	V	V	D	F	N	G	K	I	L	Y	E	K	K	D	K	P	Y	M	A	P	N	G	H	G	G	L	F	K	A	L	K	D	N	G	I	L	E	F	M	N	E	K	G	I	K	Y	S	V	A	H	N	V	D	N	I	L
Template Known Secondary structure						T	G	G	G	G	S		T	T	S												B		T	T	S		B					T	T									G	G	G								T	T									T									T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.													.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	K	N	G	T	A	I	S	L	E	E	K	P	L	E	P	.	.	.	.	.	.	.	.	.	.	.	.	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	D
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.
Template Sequence		C	K	D	V	D	P	N	M	I	G	Y	M	D	L	L	Q	S	E	I	C	I	K	I	V	K	K	G	F	K	E	E	K	V	G	V	L	V	K	E	Q	E	R	.	I	K	V	V	E	Y	T	E	L	T	D	E	L	N	K	Q	L	S	N	G	E	F	I	Y	N	C	G	H	I	S	I	N	G	Y	S	T	S
Template Known Secondary structure				S	S											T	T		S										S	T	T		S								T	T		.						G	G	G			T	T	T	T		B		T	T	S		B	S	S
Template Predicted Secondary structure																																												.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		183	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Q	M	A	K	N	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	E	K	A	A	E	Y	Q
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions