Phyre 2 alignment of P37744 with c3gueB

Job Description P37744
Confidence 98.69% Date Thu Jan 5 11:57:17 GMT 2012

Rank 69 Aligned Residues 273

% Identity 14% Template c3gueB_

PDB info PDB header:transferase Chain: B: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase 2; PDBTitle: crystal structure of udp-glucose phosphorylase from trypanosoma2 brucei, (tb10.389.0330)

Resolution 1.92 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																											.																.	.	.	.																																.	.	.
Query SS confidence																											.																.	.	.	.																																.	.	.
Query Sequence	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	.	Y	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	.	.	.	.	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	.	.	.
Query Conservation																											.																.	.	.	.																																.	.	.
Alig confidence														.	.	.											.																.	.	.	.				.																												.	.	.
Template Conservation														.	.	.																																		.
Template Sequence	V	L	K	L	N	G	G	L	G	T	G	M	G	.	.	.	L	N	G	P	K	S	L	L	Q	V	K	N	G	Q	T	F	L	D	F	T	A	L	Q	L	E	H	F	R	Q	V	R	N	V	.	P	F	M	L	M	N	S	F	S	T	S	G	E	T	K	N	F	L	R	K	Y	P	T	L	Y	E	V	F	D	S
Template Known Secondary structure										G	G	G	T	.	.	.		S	S		G	G	G	S				T	T																		T			.								T	T	T								G	G	G	S					T	T
Template Predicted Secondary structure														.	.	.																																		.
Template SS confidence
	78	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

	78	.	80	.	.	.																								.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query Sequence	L	Q	Y	K	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	.	.	.	.	.	.	.	F	I	G	G	D	D	C	A	L	V	L	G	D	N	I	F	Y	G	H	D	L	P	K	L	M	E	A	A	V
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	I	E	L	M	Q	N	R	V	P	K	I	R	Q	D	N	F	F	P	V	T	Y	E	A	D	P	T	C	E	W	V	P	P	G	H	G	D	V	Y	T	V	L	Y	S	S	G	K	L	D	Y	L	L	G	K	G	Y	R	Y	M	F	I	S	N	G	D	N	L	G	A	T	L	D	V	R	L	L	D	Y	M	H
Template Known Secondary structure														T	T	T			B				T	T		G	G	G	G						G	G	G								T	S								T	T									T	T		T	T
Template Predicted Secondary structure
Template SS confidence
	156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

	128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170												.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																												.	.	.																	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.																	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	K	N	.	.	.	G	T	A	I	S	L	E	E	K	P	L	E	P	K	S	N	.	.	.	.	.	.	.	.	.	.	.	Y	A	V	T	G	L	Y	F	Y	D	N	D	V	V	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.																	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.																	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	E	K	Q	L	G	F	L	M	E	V	C	R	R	T	E	S	D	K	K	G	G	H	L	A	Y	K	D	V	I	D	R	R	R	F	V	L	R	E	S	A	Q	C	P	K	E	D	E	D	S	F	Q	N	I	A	K	H	C	F	F	N	T	N	N	I	W	I	N	L	M	E	L	K	K	M	M	D	E	Q	L	G
Template Known Secondary structure			T		S										T	T			S	S																			G	G	G	S		G	G	G					T		T	T	T	S																						T	T	T
Template Predicted Secondary structure
Template SS confidence
	236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

											185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	Q	M	A	K	N	L	K	P	S	A	R	G	E	L	E	I	T	D	I	N	R	I	Y	L	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I	E	A	S	N	F	I	A	T	I	E	E	R	Q	G	L	K	V	S	C	P
Query Conservation	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	V	L	R	L	P	V	M	R	N	P	K	T	V	N	P	Q	D	S	Q	S	T	K	V	Y	Q	L	E	V	A	M	G	A	A	I	S	L	F	D	R	S	E	A	V	V	V	P	R	E	R	F	A	P	V	K	T	C	S	D	L	L	A	L	R	S	D	A	Y	Q	V	T	E	D	Q	R	L	V	L	C	E	E
Template Known Secondary structure													S	S	T	T		T	T	S										G	G	G	G	G	G	T	S	S	S								G	G	G					S	S									T	T	T					T	T	S						G	G
Template Predicted Secondary structure
Template SS confidence
	322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

	255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	E	I	A	F	R	K	G	F	I	D	V	E	Q	V	R	K	L	A	V	P	L	I	K	N	N	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence	R	N	G	K	P	P	A	I	D	L	D	G	E	H	Y	K	M	I	D	G	F	E	K	L	V	K	G	G
Template Known Secondary structure	G	T	T													S	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
	402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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