Job Description P37744 Confidence 99.90% Date Thu Jan 5 11:57:17 GMT 2012 Rank 44 Aligned Residues 222 % Identity 18% Template c3f1cB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative 2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from listeria monocytogenes Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																		.																											.
Query SS confidence																																																		.																											.
Query Sequence		M	K	M	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	.	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	.	G	L	N	L
Query Conservation																																																		.																											.
Alig confidence					.	.													.	.	.	.	.	.	.																									.																											.
Template Conservation					.	.													.	.	.	.	.	.	.
Template Sequence		L	I	Y	.	.	A	Q	I	L	A	G	M	G	N	V	S	M	.	.	.	.	.	.	.	P	K	Q	F	L	P	L	N	G	K	P	I	I	V	H	T	V	E	K	F	I	L	N	T	R	F	D	K	I	L	I	S	S	P	K	E	W	M	N	H	A	E	D	N	I	K	K	Y	I	S	D	D	R	I	V	V
Template Known Secondary structure					.	.								T	T	T	S		.	.	.	.	.	.	.		G	G	G	S			T	T													T		T	T		S								G	G	G															T	T
Template Predicted Secondary structure					.	.													.	.	.	.	.	.	.
Template SS confidence
		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																									.	.												.	.
Query SS confidence																									.	.												.	.
Query Sequence		Q	Y	K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	G	.	.	G	D	D	C	A	L	V	L	G	D	N	.	.	I	F	Y	G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	K	N
Query Conservation																									.	.												.	.
Alig confidence																									.	.												.	.																																		.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		I	E	G	G	E	D	R	N	E	T	I	M	N	G	I	R	F	V	E	K	T	Y	G	L	T	D	D	D	I	I	V	T	H	D	A	V	R	P	F	L	T	H	R	I	I	E	E	N	I	D	A	A	L	E	T	G	A	V	D	T	V	I	E	A	L	D	T	I	V	E	S	.	.	.	.	.	.	S	N	H
Template Known Secondary structure						S	S																T				T	T								T	T		T	T																T	S									S	S				B		.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	A	I	S	L	E	E	K	P	L	E	P	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	D	V	V	Q	M	A	K	N	L	K	P	S	A	R	G	E	L	E	I	T	D	I	N	R	I	Y	L	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I
Query Conservation
Alig confidence											.	.	.																								.	.																																.
Template Conservation											.	.	.																								.	.																																.
Template Sequence		E	V	I	T	D	I	P	V	R	.	.	.	D	H	M	Y	Q	G	Q	T	P	Q	S	F	N	M	K	K	V	F	N	H	Y	Q	N	.	.	L	T	P	E	K	K	Q	I	L	T	D	A	C	K	I	C	L	L	A	G	D	D	V	K	L	V	K	G	E	I	F	.	N	I	K	I	T	T	P	Y	D	L	K
Template Known Secondary structure		S	S			B				G	.	.	.	G	G																					T	.	.	S																			T										T	T	.						S
Template Predicted Secondary structure											.	.	.																								.	.																																.
Template SS confidence
		151	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.
		235	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	N	F	I	A	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	N	A	I	I	Q	E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions