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Job DescriptionP37744
Confidence100.00%DateThu Jan 5 11:57:17 GMT 2012
Rank9Aligned Residues230
% Identity21%Templatec2x5sB_
PDB info PDB header:transferaseChain: B: PDB Molecule:mannose-1-phosphate guanylyltransferase; PDBTitle: crystal structure of t. maritima gdp-mannose2 pyrophosphorylase in apo state.
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MRKGIILAGGSGTRLYPV. TMAVSKQLLPIYD. KPMIYYPLSTLML. AGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQ
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Template Sequence  VMKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELP. . . . DEN
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GGGGTTT
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   80.........90.........100.........110..... ....120.........130.........140.........150...
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Query Sequence  YKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFY. . . . . . GHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDK
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Template Sequence  IIAEPMKKNTAPACFIGTKLADDDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTRPETGYGYIEIGE
Template Known Secondary structure  SS


TTS
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   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   154 .....160.........170 .........180.. .......190 .........200.......
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Query Sequence  N. . . . . GTAISLEEKPLEPKSN. . . . . . . . YAVTGLYFYDND. VVQMAKNL. . . . . . . . . KPSARGELEITDINRIY. . .
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Template Sequence  ELEEGVHKVAQFREKPDLETAKKFVESGRFLWNSGMFLWKAREFIEEVKVCEPSIYENLKDVDPRNFEELKKAYEKVPSI
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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   208.210.........220.........230.......
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Query Sequence  . . . . . . LEQGRLSVAMMGRGYAWLDTGTHQSLIEAS
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Template Sequence  SVDYAVMEKSKKVRVVKADFE. WSDLGNWSSVREIE
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   237..240.........250....... ..260.........270.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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