Job Description P37744 Confidence 100.00% Date Thu Jan 5 11:57:17 GMT 2012 Rank 32 Aligned Residues 241 % Identity 17% Template c2qh5B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mannose-6-phosphate isomerase; PDBTitle: crystal structure of mannose-6-phosphate isomerase from helicobacter2 pylori Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		M	K	M	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	Y	D	.	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	Q
Query Conservation																																			.
Alig confidence					.							.	.	.	.			.	.	.	.	.													.																											.														.
Template Conservation					.							.	.	.	.			.	.	.	.	.																																								.														.
Template Sequence		L	K	I	.	K	N	I	L	L	S	.	.	.	.	S	R	.	.	.	.	.	S	L	Y	P	K	Q	F	L	K	L	F	D	H	K	S	L	F	E	L	S	F	K	R	N	A	S	L	V	D	E	T	L	I	V	C	N	E	K	H	.	Y	F	L	A	L	E	E	I	K	N	E	I	K	.	N	K	S	V	G
Template Known Secondary structure					.							.	.	.	.		T	.	.	.	.	.	T	T	S		G	G	G				S	S	S													T	T		S								G	G	G	.								T	T	T	T		S	.	S
Template Predicted Secondary structure					.							.	.	.	.			.	.	.	.	.																																								.														.
Template SS confidence
		1	.	.		.	.	.	.	.	.					10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																			.	.																.	.	.
Query SS confidence																																			.	.																.	.	.
Query Sequence		Y	K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	G	G	D	D	C	A	L	V	L	G	D	N	.	.	I	F	Y	G	H	D	L	P	K	L	M	E	A	A	V	.	.	.	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	K	N
Query Conservation																																			.	.																.	.	.
Alig confidence																																			.	.																.	.	.
Template Conservation
Template Sequence		F	L	L	E	S	L	S	K	N	T	A	N	A	I	A	L	S	A	L	M	S	D	K	E	D	L	L	I	V	T	P	S	D	H	L	I	K	D	L	Q	A	Y	E	N	A	I	K	K	A	I	D	L	A	Q	K	G	F	L	V	T	F	G	V	S	I	D	K	P	N	T	E	F	G	Y	I	E	S	P	N	G
Template Known Secondary structure						S	S														T	S		T	T	S							S	S		B																			T	T	T										S	S			T	T	S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.														.
Query SS confidence																	.	.	.	.	.	.	.	.														.
Query Sequence		G	T	A	I	S	L	E	E	K	P	L	E	P	K	S	.	.	.	.	.	.	.	.	N	Y	A	V	T	G	L	Y	F	Y	D	N	D	.	V	V	Q	M	A	K	N	L	K	P	S	A	R	G	E	L	E	I	T	D	I	N	R	I	Y	L	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L
Query Conservation																	.	.	.	.	.	.	.	.														.
Alig confidence																	.	.	.	.	.	.	.	.														.												.	.	.	.	.	.																								.
Template Conservation																																																		.	.	.	.	.	.																								.
Template Sequence		L	D	V	K	R	F	I	E	K	P	S	L	D	K	A	I	E	F	Q	K	S	G	G	F	Y	F	N	S	G	M	F	V	F	Q	A	G	V	F	L	D	E	L	K	K	H	A	P	T	.	.	.	.	.	.	I	L	K	G	C	E	R	A	F	E	S	L	E	N	A	Y	F	F	E	K	K	I	A	.	R	L
Template Known Secondary structure		S	B		S				S	S																																								.	.	.	.	.	.											T							S	S					.
Template Predicted Secondary structure																																																		.	.	.	.	.	.																								.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	G	T	H	Q	S	L	I	E	A	S	N	F	I	A	T	I	E	E	R	Q	G	L	K	V	S	C	P	E	E	I	A	F	R	K	G	F	I	D
Query Conservation
Alig confidence																												.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		S	E	K	S	M	Q	D	L	E	D	M	S	I	D	I	A	L	M	Q	Q	S	H	K	I	K	M	.	.	.	.	.	V	E	L	N	A	K	W	S	D
Template Known Secondary structure							T	T	S									T	T	T	T		S					.	.	.	.	.					S			B
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions