Job Description P37744 Confidence 99.84% Date Thu Jan 5 11:57:17 GMT 2012 Rank 53 Aligned Residues 201 % Identity 13% Template c2px7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from thermus thermophilus hb8 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	M	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	Q	Y
Query Conservation
Alig confidence						.									.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.									.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	V	S	.	V	L	I	P	A	A	G	G	.	.	.	.	.	.	.	.	.	.	.	P	K	A	F	L	Q	V	G	G	R	T	L	L	E	W	T	L	A	A	F	R	D	A	A	E	V	L	V	A	L	P	P	G	A	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	G	L	G	A
Template Known Secondary structure						.									.	.	.	.	.	.	.	.	.	.	.		G	G	G		B		S	S	S	B									T	T	T		S								T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S
Template Predicted Secondary structure						.									.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10	.	.												.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	G	G	D	D	C	A	L	V	L	G	D	N	.	I	F	Y	G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	K	N	G	T	A	I	S
Query Conservation																																		.
Alig confidence																																		.																														.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		V	F	L	E	G	G	A	T	R	Q	A	S	V	A	R	L	L	E	A	A	S	L	P	L	V	L	V	H	D	V	A	R	P	F	V	S	R	G	L	V	A	R	V	L	E	A	A	Q	R	S	G	A	A	V	P	V	L	P	V	P	D	T	.	.	.	.	.	.	.	L	M	A	P	E	G	E	A	Y	G	R
Template Known Secondary structure								S	S														S	S							T	T																				S										S		.	.	.	.	.	.	.						S	S	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	K	P	L	E	P	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	D	V	V	Q	M	A	K	N	L	K	P	S	A	R	G	E	L	E	I	T	D	I	N	R	I	Y	L	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I	E	A	S	N	F
Query Conservation
Alig confidence															.	.	.	.														.	.																																.
Template Conservation															.	.	.	.														.	.																																.
Template Sequence		V	V	P	R	E	A	F	R	L	V	Q	T	P	.	.	.	.	Q	G	F	F	T	A	L	L	R	E	A	H	A	.	.	Y	A	R	R	K	G	L	E	A	S	D	D	A	Q	L	V	Q	A	L	G	Y	P	V	A	L	V	E	G	E	A	T	.	A	F	K	I	T	H	P	Q	D	L	V	L	A	E	A	L
Template Known Secondary structure					G	G	G						S		.	.	.	.														.	.						T				S	S								T	T										T	T	.						S
Template Predicted Secondary structure															.	.	.	.														.	.																																.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		208	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions