Job Description P37744 Confidence 98.22% Date Thu Jan 5 11:57:17 GMT 2012 Rank 71 Aligned Residues 139 % Identity 15% Template c2oefA_ PDB info PDB header:transferase Chain: A: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase 2, PDBTitle: open and closed structures of the udp-glucose2 pyrophosphorylase from leishmania major Resolution 2.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																.	.	.	.					.																													.
Query SS confidence																												.																.	.	.	.					.																													.
Query Sequence		G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	.	Y	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	.	.	.	.	A	G	I	R	.	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	.
Query Conservation																												.																.	.	.	.					.																													.
Alig confidence															.	.	.											.																.	.	.	.					.																													.
Template Conservation															.	.	.
Template Sequence		V	L	K	L	N	G	G	L	G	T	G	X	G	.	.	.	L	C	D	A	K	T	L	L	E	V	K	D	G	K	T	F	L	D	F	T	A	L	Q	V	Q	Y	L	R	Q	H	C	S	E	H	L	R	F	X	L	X	D	S	F	N	T	S	A	S	T	K	S	F	L	K	A	R	Y	P	W	L	Y	Q	V	F
Template Known Secondary structure									B	S	G	G	G	T	.	.	.			S	B	G	G	G	S				T	T																		T		T	T									T	T	T																	T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
																												79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	.	.	.	.	.	.	.	F	I	G	G	D	D	C	A	L	V	L	G	D	N	I	F	Y	G	H	D	L	P	K	L	M	E	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	E	V	E	L	X	Q	N	Q	V	P	K	I	L	Q	D	T	L	E	P	A	A	W	A	E	N	P	A	Y	E	W	A	P	P	G	H	G	D	I	Y	T	A	L	Y	G	S	G	K	L	Q	E	L	V	E	Q	G	Y	R	Y	X	F	V	S	N	G	D	N	L	G	A	T	I	D	K	R	V	L	A	Y
Template Known Secondary structure					T												T	T	T		S	B				T	T		G	G	G	G						T	T									T	S								T	T									T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	E	K	E	K	I	D	F	L	X	E	V	C	R	R	T	E	S	D	K	K	G
Template Known Secondary structure						T		S										G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions