Job Description P37744 Confidence 100.00% Date Thu Jan 5 11:57:17 GMT 2012 Rank 14 Aligned Residues 279 % Identity 17% Template c2cu2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative mannose-1-phosphate guanylyl transferase; PDBTitle: crystal structure of mannose-1-phosphate geranyltransferase from2 thermus thermophilus hb8 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																						.														.														.
Query SS confidence																						.														.														.
Query Sequence		M	K	M	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	.	T	M	A	V	S	K	Q	L	L	P	I	Y	D	.	K	P	M	I	Y	Y	P	L	S	T	L	M	L	.	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N
Query Conservation																						.														.														.
Alig confidence					.																	.														.														.																			.	.	.	.	.	.	.
Template Conservation					.																																																																.	.	.	.	.	.	.
Template Sequence		M	K	T	.	Y	A	L	V	M	A	G	G	R	G	E	R	L	W	P	L	S	R	E	D	R	P	K	P	F	L	P	L	F	E	G	K	T	L	L	E	A	T	L	E	R	L	A	P	L	V	P	P	E	R	T	L	L	A	V	R	R	D	Q	E	A	V	A	.	.	.	.	.	.	.	R	P	Y	A	D	G
Template Known Secondary structure					.											G	G	G	T	T	T		B	T	T	B		G	G	G		B		G	G	G		B										T	T	T	S		G	G	G							G	G	G					.	.	.	.	.	.	.	G	G	G		S	S
Template Predicted Secondary structure					.																																																																.	.	.	.	.	.	.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.	.	70	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																									.	.	.															.															.	.	.
Query SS confidence																									.	.	.															.															.	.	.
Query Sequence		L	Q	Y	K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	.	.	.	G	G	D	D	C	A	L	V	L	G	D	N	I	F	.	Y	G	H	D	L	P	K	L	M	E	A	A	V	N	.	.	.	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E
Query Conservation																									.	.	.															.															.	.	.
Alig confidence																									.	.	.															.															.	.	.
Template Conservation
Template Sequence		I	R	L	L	L	E	P	L	G	R	D	T	A	G	A	V	L	L	G	V	A	E	A	L	K	E	G	A	E	R	L	L	V	L	P	A	D	H	Y	V	G	D	D	E	A	Y	R	E	A	L	A	T	M	L	E	A	A	E	E	G	F	V	V	A	L	G	L	R	P	T	R	P	E	T	E	Y	G	Y	I	R
Template Known Secondary structure		S						S	S																			T		S							S	S				S																		T	T										S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		151	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180													.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.
Predicted Secondary structure							.	.	.	.													.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence							.	.	.	.													.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		F	D	K	N	G	.	.	.	.	T	A	I	S	L	E	E	K	P	L	E	P	.	.	.	.	.	.	.	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	N	D	V	V	Q	M	A	K	N	L	K	P	S	A	R	G	E	.	.	.	.	.	L	E	I	T	D
Query Conservation							.	.	.	.													.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence							.	.	.	.													.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		L	G	P	R	E	G	A	W	Y	R	G	E	G	F	V	E	K	P	S	Y	A	E	A	L	E	Y	I	R	K	G	Y	V	W	N	G	G	V	F	A	F	A	P	A	T	M	A	E	L	F	R	R	H	L	P	S	H	H	E	A	L	E	R	L	L	A	G	A	S	L	E	E	V	Y	A	G	L	P	K	I	S
Template Known Secondary structure							T	T																						T	T																																			T	T									T	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		I	N	R	I	Y	L	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I	E	A	S	N	F	I	A	T	I	E	E	R	Q	G	L	K	V	S	C	P	E	E	I	A	F	.	.	R	K	G	F	I	D	V	E	Q	V	R	K	L	A	V	P	L	I	K	N	N
Query Conservation																																																											.	.
Alig confidence																						.													.	.	.	.																					.	.
Template Conservation																						.													.	.	.	.
Template Sequence		I	D	Y	G	V	M	E	K	A	E	R	V	R	V	V	L	G	R	F	P	.	W	D	D	V	G	N	W	R	A	L	E	R	.	.	.	.	V	F	S	Q	D	P	H	E	N	V	V	L	G	E	G	R	H	V	A	L	D	T	F	G	C	V	V	Y	A	D	R	G	V	V	A	T	L	G	V	S	G	L	V
Template Known Secondary structure						T	G	G	G		S	S								S		.						S	T	T					.	.	.	.			T	S		T	T	S					S	S	S						S		B	S						S	S	S						S		B	S
Template Predicted Secondary structure																						.													.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		281				.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		Y	.	.	.	G	Q	Y	L	Y	K	M	T	K	D	S
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		V	A	K	V	G	D	E	V	L	V	V	P	K	D	W
Template Known Secondary structure						T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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