Job Description P37744 Confidence 100.00% Date Thu Jan 5 11:57:17 GMT 2012 Rank 11 Aligned Residues 235 % Identity 24% Template c1yp3C_ PDB info PDB header:transferase Chain: C: PDB Molecule:glucose-1-phosphate adenylyltransferase small PDBTitle: crystal structure of potato tuber adp-glucose2 pyrophosphorylase in complex with atp Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	T	M	A	V	S	K	Q	L	L	P	I	Y	D	.	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	Q	Y	K	V	Q
Query Conservation																															.
Alig confidence																															.																												.
Template Conservation																																																											.
Template Sequence		L	G	I	I	L	G	G	G	A	G	T	R	L	Y	P	L	T	K	K	R	A	K	P	A	V	P	L	G	A	N	Y	R	L	I	D	I	P	V	S	N	C	L	N	S	N	I	S	K	I	Y	V	L	T	Q	F	N	S	.	A	S	L	N	R	H	L	S	R	A	Y	A	S	E	G	F	V	E	V	L	A	A
Template Known Secondary structure									S	S		T	T	S	T	T	T	T	T	T	S		G	G	G	S			T	T	T			T	T										T	T									S	S			.																						S
Template Predicted Secondary structure																																																											.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		84	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure						.	.	.	.	.	.	.																	.	.																																							.	.
Query SS confidence						.	.	.	.	.	.	.																	.	.																																							.	.
Query Sequence		P	S	P	D	.	.	.	.	.	.	.	G	L	A	Q	A	F	I	I	G	E	E	F	I	G	G	D	.	.	D	C	A	L	V	L	G	D	N	I	F	Y	G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	.	.	D	P	E	R	Y	G	V	V	E	F	D
Query Conservation						.	.	.	.	.	.	.																	.	.																																							.	.
Alig confidence						.	.	.	.	.	.	.																	.	.																																							.	.
Template Conservation
Template Sequence		Q	Q	S	P	E	N	P	D	W	F	Q	G	T	A	D	A	V	R	Q	Y	L	W	L	F	E	E	H	T	V	L	E	Y	L	I	L	A	G	D	H	L	Y	R	M	D	Y	E	K	F	I	Q	A	H	R	E	T	D	A	D	I	T	V	A	A	L	P	M	D	E	K	R	A	T	A	F	G	L	M	K	I	D
Template Known Secondary structure		S		S	S	S			S	S																T	T	S			S							S	S																	T	T		S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.																						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	G	T	A	I	S	L	E	E	K	P	L	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	D	V	V	Q	M	A	K	N	L	K	P	S	A	R	G	E	L	E	I	T	D	I	N	R	I	Y	L	E	Q	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																																																																					.
Template Sequence		E	E	G	R	I	I	E	F	A	E	K	P	Q	G	E	Q	L	Q	A	M	K	V	D	T	T	I	L	G	L	D	D	K	R	A	K	E	M	P	F	I	A	S	M	G	I	Y	V	I	S	K	D	V	M	L	N	L	L	R	D	K	F	P	G	A	N	D	F	.	G	S	E	V	I	P	G	A	T	S	L	G
Template Known Secondary structure		T	T		B							S								T	T				G	G	G	G	T																															T	T		T	T				T	.	T	T	T							T	T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I	E	A	S	N	F	I	A	T
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		M	R	V	Q	A	Y	L	Y	D	G	Y	.	W	E	D	I	G	T	I	E	A	F	Y	N	A	N	L	G	I	T	K
Template Known Secondary structure											S		.					S	S										G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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