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Job DescriptionP37744
Confidence100.00%DateThu Jan 5 11:57:17 GMT 2012
Rank29Aligned Residues223
% Identity19%Templatec1jylC_
PDB info PDB header:transferaseChain: C: PDB Molecule:ctp:phosphocholine cytidylytransferase; PDBTitle: catalytic mechanism of ctp:phosphocholine2 cytidylytransferase from streptococcus pneumoniae (licc)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKMRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQY
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Template Sequence  IRV. KAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLK. EQFDYLK. . . EKYGVRLVF
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Query Sequence  KVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDKNGTAISL
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Template Sequence  NDKYADYNNFYSLYLVKEEL. . ANSYVIDADNYLFKNMFRNDL. . . . . . TRSTYFSVYREDCTN. EWFLVYGDDYKVQDI
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   7980.........90........ .100.........110......... 120.........130.... .....140.........
 
   161........170.........180.. .......190.........200.........210.........220.........230......
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Query Sequence  EEKPLEPKSNYAVTGLYFYDND. . . . VVQMAKNLKPSARGELEITDINRIYLEQGRLSVAMMGRGYAWLDTGTHQSLIEA
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Template Sequence  IVD. . . SKAGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKL
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   150.. .......160.........170.........180.........190.........200.........210.........220......
 
   237..240
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Query Sequence  SNFI
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Template Sequence  EEIL
Template Known Secondary structure  T
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   227..230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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