Job Description P0AD01 Confidence 99.86% Date Thu Jan 5 11:19:32 GMT 2012 Rank 101 Aligned Residues 177 % Identity 12% Template d1qo0d_ SCOP info Flavodoxin-like CheY-like Positive regulator of the amidase operon AmiR Resolution 2.25

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	V	L	I	I	D	D	D	A	M	V	A	E	L	N	R	R	Y	V	A	Q	I	P	G	F	Q	C	C	G	T	A	S	T	L	E	K	A	K	E	I	I	F	N	S	D	T	P	I	D	L	I	L	L	D	I	Y	M	Q	K	E	N	G	L	D	L	L	P	V	L	H	N	A	R	C	K	S	D	V	I
Query Conservation
Alig confidence																									.						.										.	.	.	.	.	.																													.
Template Conservation																									.						.										.	.	.	.	.	.																													.
Template Sequence		L	Q	V	L	V	L	N	P	P	G	E	V	S	D	A	L	V	L	Q	L	I	R	I	.	G	C	S	V	R	.	Q	C	W	P	P	P	E	A	F	.	.	.	.	.	.	D	V	P	V	D	V	V	F	T	S	I	F	Q	N	R	H	H	D	E	I	A	A	L	L	A	A	G	T	.	P	R	T	T	L	V
Template Known Secondary structure								S		T	T														.	T					.				S			S	S		.	.	.	.	.	.	S	S			S								S	S	T												S		.	T	T
Template Predicted Secondary structure																									.						.										.	.	.	.	.	.																													.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40		.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	S	S	A	A	D	A	A	T	I	K	D	S	L	H	Y	G	V	V	D	Y	L	I	K	P	F	Q	A	S	R	F	E	E	A	L	T	G	W	R	Q	K	K	M	A	L	E	K	H	Q	Y	Y	D	Q	A	E	L	D	Q	L	I	H	G	S	S	S	N	E	Q	D	P	R	R	L	P	K	G	L	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	V	E	Y	E	S	P	A	V	L	S	Q	I	I	E	L	E	C	H	G	V	I	T	Q	P	L	D	A	H	R	V	L	P	V	L	V	S	A	R	R	I	S	E	E	M	A	K	L	K	Q	K	T	E	Q	L	Q	D	R	I	A	G	Q	A	R	I	N	Q	A	K	V	L	L	M	Q	R	H	G	W	D
Template Known Secondary structure								S											T		S					S	S			G	G	G																																															T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	R	T	L	C	Q	W	I	D	A	H	Q	D	Y	E	F	S	T	D	E	L	A	N	E	V
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		E	R	.	E	A	H	Q	H	L	S	R	E	A	M	K	R	R	E	P	I	L	K	I	A	Q	E	L
Template Known Secondary structure				.											T	T	T	T	S
Template Predicted Secondary structure				.
Template SS confidence
		164	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions