Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD01
Confidence90.07%DateThu Jan 5 11:19:32 GMT 2012
Rank234Aligned Residues69
% Identity12%Templated1p4xa2
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   166...170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 



















Query SS confidence 






































































Query Sequence  TLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQ
Query Conservation       
        
   

  
 

  

   
  
               


    

      

  
Alig confidence 















































.









.










Template Conservation   

  
       

  


  
 
    

  
  

  
 
 
   .  
 
   
 .

  
      
Template Sequence  TILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERS. TEDERKILIH. MDDAQQDHAEQ
Template Known Secondary structure  TTTT

SSS
TSS
.SSSTT
.

Template Predicted Secondary structure 









.



.
Template SS confidence 






































































   162.......170.........180.........190.........200......... 210......... 220.........230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions