Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD01
Confidence91.14%DateThu Jan 5 11:19:32 GMT 2012
Rank213Aligned Residues75
% Identity5%Templated1lnwa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   163......170.........180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 






















Query SS confidence 












































































Query Sequence  TLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
Query Conservation          
        
   

  
 

  

   
  
               


    

      

     
Alig confidence 


















































..























Template Conservation 
     

  
      
  


    
    


 
  
   


 
   ..  
 
   
 

  
         
Template Sequence  TPPDVHVLKLIDEQRGLNLQDLGRQXCRDKALITRKIRELEGRNLVRRERN. . PSDQRSFQLFLTDEGLAIHQHAEA
Template Known Secondary structure 
SSTT
BTT

TTS
..SSSSSS
Template Predicted Secondary structure 









..





Template SS confidence 












































































   36...40.........50.........60.........70.........80...... ...90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions