Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD01
Confidence92.13%DateThu Jan 5 11:19:32 GMT 2012
Rank188Aligned Residues45
% Identity18%Templated1i1ga1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   163......170.........180.........190.........200.........
Predicted Secondary structure 











Query SS confidence 














































Query Sequence  TLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILF
Query Conservation          
        
   

  
 

  

   
  
       
Alig confidence 














..





























Template Conservation   
  

  
    
 ..
  


  



  

  

  
   


 
Template Sequence  RDKIILEILEKDART. . PFTEIAKKLGISETAVRKRVKALEEKGIIE
Template Known Secondary structure 
TT
..
TS
TSS
Template Predicted Secondary structure 



..








Template SS confidence 














































   5....10......... 20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions