Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD01
Confidence95.13%DateThu Jan 5 11:19:32 GMT 2012
Rank146Aligned Residues107
% Identity8%Templatec3n75E_
PDB info PDB header:lyaseChain: E: PDB Molecule:lysine decarboxylase, inducible; PDBTitle: x-ray crystal structure of the escherichia coli inducible lysine2 decarboxylase ldci
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  VAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATI
Query Conservation      
   
        
  
  
 


  
      







 

  

 


  

       

 

        
Alig confidence 










.





.













.













...




























Template Conservation      
      .      .      
       .              ...                             
Template Sequence  PIRELHRALER. LNFQIV. YPNDRDDLLKLIEN. NARLCGVIFDWDKY. . . NLELCEEISKMNENLPLYAFANTYSTLDV
Template Known Secondary structure  .TT
.

SS.
TT...
TT


TT



G
Template Predicted Secondary structure  .


.

.







...








Template SS confidence 















































































   18.20........ .30.... .....40........ .50.........60.. .......70.........80.........90.
 
   93......100........ .110.........120.....
Predicted Secondary structure 






.
Query SS confidence 















.
















Query Sequence  KDSLHYGVVDYLIKPF. QASRFEEALTGWRQKKM
Query Conservation    

  

  

 

 .    
   
        
Alig confidence 















.
















Template Conservation                           
      
 
Template Sequence  SLNDLRLQISFFEYALGAAEDIANKIKQTTDEYI
Template Known Secondary structure  GGTTS




TT
Template Predicted Secondary structure 



Template SS confidence 

































   92.......100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions