Phyre 2 alignment of P0AD01 with c3f8fA

Job Description P0AD01
Confidence 88.56% Date Thu Jan 5 11:19:32 GMT 2012

Rank 255 Aligned Residues 66

% Identity 11% Template c3f8fA_

PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, padr-like family; PDBTitle: crystal structure of multidrug binding transcriptional regulator lmrr2 complexed with daunomycin

Resolution 2.20 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence	W	I	D	A	H	Q	D	Y	E	F	S	T	D	E	L	A	N	E	V	.	.	.	.	.	.	.	.	N	I	S	R	V	S	C	R	K	Y	L	I	W	L	V	N	C	H	I	L	F	T	S	I	H	Y	G	V	T	G	R	P	V	Y	R	Y	R	I	Q	A	E	H	Y	S	L	L	K	Q	Y
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																									.	.
Template Conservation																																																				.	.
Template Sequence	L	L	N	V	L	K	Q	G	D	N	Y	V	Y	G	I	I	K	Q	V	K	E	A	S	N	G	E	M	E	L	N	E	A	T	L	Y	T	I	F	K	R	L	E	K	D	G	I	I	S	S	Y	W	.	.	G	D	E	G	G	R	R	K	Y	Y	R	L	T	E	I	G	H	E	N	M	R	L	A
Template Known Secondary structure										B													T	T	T	S																		T	T	S						.	.
Template Predicted Secondary structure																																																				.	.
Template SS confidence
	17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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