Job Description P0AD01 Confidence 99.86% Date Thu Jan 5 11:19:32 GMT 2012 Rank 102 Aligned Residues 121 % Identity 21% Template c2qsjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-binding response regulator, luxr family; PDBTitle: crystal structure of a luxr family dna-binding response2 regulator from silicibacter pomeroyi Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	N	V	L	I	I	D	D	D	A	M	V	A	E	L	N	R	R	Y	V	A	Q	I	P	G	F	Q	C	C	G	T	A	S	T	L	E	K	A	K	E	I	I	F	N	S	D	T	P	I	D	L	I	L	L	D	I	Y	M	Q	K	E	N	G	L	D	L	L	P	V	L	H	N	A	R	C	K	S	D	V
Query Conservation
Alig confidence																																														.																				.	.	.	.	.	.
Template Conservation																																														.																				.	.	.	.	.	.
Template Sequence		L	T	V	V	L	I	V	D	D	H	H	L	I	R	A	G	A	K	N	L	L	E	G	A	F	S	G	M	R	V	E	G	A	E	T	V	S	D	A	L	A	F	L	E	.	A	D	N	T	V	D	L	I	L	L	D	V	A	I	D	G	L	V	R	.	.	.	.	.	.	L	K	R	F	D	P	S	N	A	V
Template Known Secondary structure										S																	T	T							S	S										.	T	T				S														.	.	.	.	.	.						T	T	S
Template Predicted Secondary structure																																														.																				.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	I	S	S	A	A	D	A	A	T	I	K	D	S	L	H	Y	G	V	V	D	Y	L	I	K	P	F	Q	A	S	R	F	E	E	A	L	T	G	W	R	Q	K	K	M	A	L	E	K	H
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		A	L	I	S	G	E	H	.	.	E	L	I	R	A	A	L	E	A	G	A	D	G	F	I	P	K	S	A	D	P	Q	V	L	I	H	A	V	S	L	I	L	E	G	E	I	F	L	P	R	S
Template Known Secondary structure									.	.									T	T		S	B				T	T	S														T	T			B			S
Template Predicted Secondary structure									.	.
Template SS confidence
		80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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