Job Description P0AD01 Confidence 72.59% Date Thu Jan 5 11:19:32 GMT 2012 Rank 448 Aligned Residues 118 % Identity 14% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																		.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	V	L	I	I	D	D	D	A	M	V	A	E	L	N	R	R	Y	V	A	Q	I	P	G	F	Q	C	C	G	T	A	S	T	L	E	K	A	K	E	I	I	F	N	S	D	T	P	I	D	L	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	I	Y	M	Q	K	E	N	G
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		L	K	I	A	L	I	S	Q	N	E	N	L	L	N	L	F	P	K	L	A	L	E	K	.	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	Q	D	E	V	D	A	I	I	S	R	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I	S	I	K	V	T	R	F	D	T
Template Known Secondary structure									S																.	T																					T	T	T		S														T	T		S	S
Template Predicted Secondary structure																									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	D	L	L	P	V	L	H	N	A	R	C	K	S	D	V	I	V	I	S	S	.	A	A	D	A	A	T	I	K	D	S	L	H	Y	G	V	V	D	Y	L	I	K	P	F	Q	A	S	R	F	E	E	A	L	T	G	W	R	Q
Query Conservation																							.
Alig confidence																							.																						.	.
Template Conservation																																													.	.
Template Sequence		M	R	A	V	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	Y	K	H	S	I	V	D	K	H	E	I	E	A	M	L	G	V	K	I	K	E	F	L	F	S	.	.	S	E	D	E	I	T	T	L	I	S	K	V	K	T
Template Known Secondary structure									G	G	G		S								S	S		S	S										T										.	.	S	G	G	G
Template Predicted Secondary structure																																													.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions