 |
Job Description | P0AD01 | Confidence | 96.14% | Date | Thu Jan 5 11:19:32 GMT 2012 |
Rank | 126 | Aligned Residues | 68 |
% Identity | 22% | Template | c2oqgA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein; |
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
|
Resolution | 1.54 Å |
|
 |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | L | C | Q | W | I | D | A | H | Q | D | Y | E | F | S | T | D | E | L | A | N | E | V | N | I | S | R | V | S | C | R | K | Y | L | I | W | L | V | N | C | H | I | L | F | T | S | I | H | Y | G | V | T | G | R | P | V | Y | R | Y | R | I | Q | A | E | H | Y | S | L | L | K | Q | Y |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|   |   |   | . | . | . | . |
|   |
|
| . |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
E | T | R | W | E | I | L | T | E | L | G | R | A | D | Q | S | A | S | S | L | A | T | R | L | P | V | S | R | Q | A | I | A | K | H | L | N | A | L | Q | A | C | G | L | V | E | S | V | . |
. |
. |
. |
K | V | G | R | . |
E | I | R | Y | R | A | L | G | A | E | L | N | K | T | A | R | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | S |
| B |
|  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | . | . | . | . |  |  | T | T | . |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . |  |  |
|
| . |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
. | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|