Job Description P0AD01 Confidence 99.91% Date Thu Jan 5 11:19:32 GMT 2012 Rank 53 Aligned Residues 215 % Identity 15% Template c2hqrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	V	L	I	I	D	D	D	A	M	V	A	E	L	N	R	R	Y	V	A	Q	I	P	G	F	Q	C	C	G	T	A	S	T	L	E	K	A	K	E	I	I	F	N	S	D	T	P	I	D	L	I	L	L	D	I	Y	M	Q	K	E	N	G	L	D	L	L	P	V	L	H	N	A	R	C	K	S	D	V	I
Query Conservation
Alig confidence																									.						.																	.	.						.	.	.	.
Template Conservation																									.						.																	.	.						.	.	.	.
Template Sequence		M	R	V	L	L	I	E	K	N	S	V	L	G	G	E	I	E	K	G	L	N	V	K	.	G	F	M	A	D	.	V	T	E	S	L	E	D	G	E	Y	L	M	D	I	R	N	.	.	Y	D	L	V	M	.	.	.	.	V	S	D	K	N	A	L	S	F	V	S	R	I	K	E	K	H	S	S	I	V	V	L
Template Known Secondary structure									S													G	G	G	.	T					.			S	S									T	T	S		.	.		S				.	.	.	.				T	T													T	T	S
Template Predicted Secondary structure																									.						.																	.	.						.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	S	S	A	A	D	A	A	T	I	K	D	S	L	H	Y	G	V	V	D	Y	L	I	K	P	F	Q	A	S	R	F	E	E	A	L	T	G	W	R	Q	K	K	M	A	L	E	K	H	Q	Y	Y	D	Q	A	E	L	D	Q	L	I	H	G	S	S	S	N	E	Q	D	P	R	R	L	P	K	G	L	T	P
Query Conservation
Alig confidence																																																								.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		V	S	S	D	N	P	T	S	E	E	E	V	H	A	F	E	Q	G	A	D	D	Y	I	A	K	P	Y	R	S	I	K	A	L	V	A	R	I	E	A	R	L	R	F	W	G	S	N	V	I	E	I	G	D	L	.	.	.	.	.	.	T	I	S	P	D	E	E	K	I	I	Y	K	G	R	E	V	E	V	K	G
Template Known Secondary structure					S	S													T		S					T	T		S		T											T	S	S					S				T	T		.	.	.	.	.	.				T	T	T	T					T	T							S
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		Q	T	L	R	T	L	C	Q	W	I	D	A	H	Q	D	Y	E	F	S	T	D	E	L	A	N	E	V	.	.	.	.	.	N	I	S	R	V	S	C	R	K	Y	L	I	W	L	V	N	C	H	I	L	F	T	S	I	H	Y	G	V	T	G	R	P	V	Y	R	Y	R	I	Q	A	E	H	Y	S
Query Conservation																													.	.	.	.	.
Alig confidence				.																									.	.	.	.	.																																.
Template Conservation				.																																																													.
Template Sequence		K	P	.	F	E	V	L	T	H	L	A	R	H	R	D	Q	I	V	S	K	E	Q	L	L	D	A	I	W	E	E	P	E	M	V	T	P	N	V	I	E	V	A	I	N	Q	I	R	Q	K	M	D	K	P	L	G	I	S	T	V	E	T	V	R	.	R	R	G	Y	R	F	C	Y	P	K	P	A
Template Known Secondary structure		T	T	.	T									T		S															S	S		S		G	G	G	T														T	T	S	S	S							S	.	S	S								G	G	G
Template Predicted Secondary structure				.																																																													.
Template SS confidence
		147	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions