 |
Job Description | P0AD01 | Confidence | 95.77% | Date | Thu Jan 5 11:19:32 GMT 2012 |
Rank | 134 | Aligned Residues | 65 |
% Identity | 22% | Template | c1r22B_ |
PDB info |
PDB header:transcription repressor | Chain: B: PDB Molecule:transcriptional repressor smtb; |
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
|
Resolution | 2.30 Å |
|
 |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | L | C | Q | W | I | D | A | H | Q | D | Y | E | F | S | T | D | E | L | A | N | E | V | N | I | S | R | V | S | C | R | K | Y | L | I | W | L | V | N | C | H | I | L | F | T | S | I | H | Y | G | V | T | G | R | P | V | Y | R | Y | R | I | Q | A | E | H | Y | S | L | L |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   | . | . | . | . |
|   |
|   | . |   |   |   |
|   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
P | N | R | L | R | L | L | S | L | L | A | R | S | E | L | S | V | G | D | L | A | Q | A | I | G | V | S | E | S | A | V | S | H | Q | L | R | S | L | R | N | L | R | L | V | S | Y | R | . |
. |
. |
. |
K | Q | G | R | . |
H | V | Y | Y | Q | L | Q | D | H | H | I | V | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | S | S |
| B |
|  |  |  |  |  |  |  |  | T | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | . | . | . | . |  |  | T | T | . |  |  |  |  |  |  | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . |  |  |
|
| . |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
. | . | . | . | |
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|