Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD01
Confidence94.09%DateThu Jan 5 11:19:32 GMT 2012
Rank162Aligned Residues93
% Identity13%Templatec1bmtB_
PDB info PDB header:methyltransferaseChain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30 .........40.........50.........60.. .......70.........80...
Predicted Secondary structure 






..













..







Query SS confidence 






















. .































. .




















Query Sequence  DDDAMVAELNRRYVAQIPGFQCC. . GTASTLEKAKEIIFNSDTPIDLILLDIYMQKE. . NGLDLLPVLHNARCKSDVIVI
Query Conservation 

       
   
        
..  
  
 


  
      







 

  ..

 


  

       

 
Alig confidence 













.







..
















..












..




















Template Conservation 
 



  

   
.   
  
  

  

 
  
       .. 
 



 
           
  
   
    
 

Template Sequence  DVHDIGKNIVGVVL. QCNNYEIVDLGVMVPAEKILRTAKEVN. . ADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIG
Template Known Secondary structure 



.TTS


SS

T..
S

STT

S
Template Predicted Secondary structure 
.










..













Template SS confidence 















































































   757..760.........770 .........780.........790....... ..800.........810.........820.........830...
 
   84.....90....... ..100...
Predicted Secondary structure 



...



Query SS confidence 













. . .





Query Sequence  SSAADAATIKDSLH. . . YGVVDY
Query Conservation 
          

 ... 

  
Alig confidence 













...





Template Conservation 

                


  
Template Sequence  GATTSKAHTAVKIEQNYSGPTVY
Template Known Secondary structure  STT

TTGGG
SS
Template Predicted Secondary structure 








Template SS confidence 






















   834.....840.........850......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions