 |
Job Description | P75959 | Confidence | 98.48% | Date | Thu Jan 5 12:16:28 GMT 2012 |
Rank | 72 | Aligned Residues | 117 |
% Identity | 17% | Template | d1bg3a3 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| Hexokinase
|
Resolution | 2.80 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |
|
| . |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
Y | Y | G | F | D | I | G | G | T | K | I | A | L | G | V | F | D | S | G | R | Q | L | Q | W | E | K | R | V | P | T | P | . |
. |
. |
. |
. |
. |
R | D | S | Y | D | A | F | L | D | A | V | C | E | L | V | A | E | A | D | Q | R | F | G | . |
. |
. |
. |
. |
C | K | G | S | V | G | I | G | I | P | . |
G | M | P | E |
Query Conservation |   |
  |
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |
|   |
|   |   |   | . |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |
Template Sequence |   |
F | L | A | L | D | L | G | G | T | N | F | R | V | L | L | V | K | I | R | S | R | T | V | E | M | H | N | K | I | Y | S | I | P | L | E | I | M | Q | G | T | G | D | E | L | F | D | H | I | V | S | C | I | S | D | F | L | D | Y | M | G | I | K | G | P | R | M | P | L | G | F | T | F | S | F | P | C | H | Q | T | N |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S | S | S |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | T | S | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S | S |
|  |  |  |  |  |  |  |
| S |
|  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
528 | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . |
  |
  |   |
70 | . | . | . | . | . | . | . | . | . | |
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
. | . | . | |
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | D | G | T | L | Y | A | A | N | . |
. |
. |
. |
V | P | A | A | S | G | K | P | L | R | A | D | L | S | A | R | L | . |
. |
. |
. |
D | R | D | . |
. |
. |
V | R | L | D | N | D | A | N | C | F | A | L | S | E | A | W | D | D | E |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
| . | . | . |
|   |
|   |
|
|   |   |
|   |
|   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|
Template Sequence |   |
L | D | C | G | I | L | I | S | W | T | K | G | F | K | A | T | D | C | E | G | H | D | V | A | S | L | L | R | D | A | V | K | R | R | E | E | F | D | L | D | V | V | A | V | V | N | D | T | V | G | T | M | M | T | C | A | Y | E | E | P |
Template Known Secondary structure |   |
T | T |
|
|  |  |
|
|
|
| T | T |
|
|
| B | S |
| T | T | S | B |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
611 | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|