Job Description P75959 Confidence 98.38% Date Thu Jan 5 12:16:28 GMT 2012 Rank 79 Aligned Residues 271 % Identity 15% Template c3smpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pantothenate kinase 1; PDBTitle: monoclinic crystal structure of human pantothenate kinase 1 alpha Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.																																														20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	Q	L	Q	W	E	K	R	V	P	T	P	R	D	S	Y	D
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	M	D	I	G	G	T	L	V	K	L	V	Y	F	E	P	K	D	I	T	A	E	E	E	Q	E	E	V	E	N	L	K	S	I	R	K	Y	L	T	S	N	T	A	Y	G	K	T	G	I	R	D	V	H	L	E	L	K	N	L	T	M	C	G	R	K	G	N	L	H	F	I	R	F	P	S	C	A	M	H
Template Known Secondary structure								S	S										S										S															S			T	T	T					G	G	G								T	T												G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	F	L	D	A	V	C	E	L	V	A	E	A	D	Q	R	F	G	C	K	G	S	V	G	I	G	I	P	G	M	P	E	T	E	D	G	T	L	Y	A	A	N	V	P	A	A	S	G	K	P	L	R	A	D	L	S	A	R	L	D	R	D	V	R	L	D	N	D	A	N	C	F	A	L	S	E	A	W	D	.
Query Conservation																																																																																	.
Alig confidence										.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation										.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	I	Q	M	G	S	E	.	.	.	.	.	K	N	F	S	S	L	H	T	T	L	C	A	T	G	G	G	A	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	D	F	R	M	I	A	D	L	Q	L	H	K	L	D	E	L	D	C	L	I	Q	G	L	L	Y	V	D
Template Known Secondary structure										.	.	.	.	.	T	T	G	G	G	T		S						S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.						.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.																			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
																									117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	F	T	Q	Y	P	L	V	M	G	L	I	L	G	T	G	V	G	G	G	L	I	F	N	G	K	P	I	T	G	K	S	Y	I	T	G	E	F	G	H	M	.	.	.	.	.	R	L	P	V	D	A	L	T	M	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation
Template Sequence		S	V	G	F	N	G	K	P	E	C	Y	Y	F	E	N	P	T	N	P	E	L	C	Q	K	K	P	Y	C	P	Y	P	M	L	L	V	N	M	G	S	G	V	S	I	L	A	V	Y	S	K	D	N	Y	K	R	V	T	G	T	S	L	G	G	G	T	F	L	G	L	C	C	L	L	T	G	C	E	T	F	E	E
Template Known Secondary structure					B	T	T	B		S						S	T	T		T	T	T										S							S	S	S									T	T									S		S																S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		G	L	D	F	P	L	R	R	C	G	C	G	Q	H	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	H	Y	Y	H	Q	P	L	Q	A	P	E	I	I	A	L	Y	D	.	.	.	Q	G	D	E	Q	A	R	A	H	V	E	R	Y	L	D	L	L	A	V	C	L	G	N	I	L	T	I	V	D
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		A	L	E	M	A	A	K	G	D	S	T	N	V	D	K	L	V	K	D	I	Y	G	G	D	Y	E	R	F	G	L	Q	G	S	A	V	A	S	S	F	G	N	M	M	S	K	E	K	R	D	S	I	S	K	E	D	L	A	R	A	T	L	V	T	I	T	N	N	I	G	S	I	A	R	M	C	A	L	N	E	N
Template Known Secondary structure											G	G	G	T	S								S	S		B	G	G	G	T	B		T	T	S				T	T	G	G	G	G	S																																				T
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	L	V	V	I	G	G	G	L	S	N	F	P	A	I	T	T	Q	L	A	D	R	L	P	R	H	L	L	P	V	A	R	V	P	R	I	E	R	A	R	H	G	D	A	G	G	M	R	G	A	A	F
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		I	D	R	V	V	F	V	G	N	F	L	R	I	N	M	V	S	M	K	L	L	A	Y	A	M	D	F	W	S	K	G	Q	L	K	.	.	A	L	F	L	E	H	E	G	Y	F	G	A	V	G	A	L	L
Template Known Secondary structure									S	G	G	G	T	S		T														T	T	T	S			.	.		B			T	T	T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.			.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions