Job Description P75959 Confidence 100.00% Date Thu Jan 5 12:16:28 GMT 2012 Rank 6 Aligned Residues 291 % Identity 24% Template c3r8eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical sugar kinase; PDBTitle: crystal structure of a hypothetical sugar kinase (chu_1875) from2 cytophaga hutchinsonii atcc 33406 at 1.65 a resolution Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																	.																																													.
Query SS confidence																																	.																																													.
Query Sequence		Y	Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	D	S	G	R	Q	L	Q	W	E	K	R	V	P	T	P	.	R	D	S	Y	D	A	F	L	D	A	V	C	E	L	V	A	E	A	D	Q	R	F	G	C	K	G	S	V	G	I	G	I	P	G	M	P	E	T	E	D	G	T	L	Y	.	A	A	N
Query Conservation																																	.																																													.
Alig confidence																																	.																																													.
Template Conservation
Template Sequence		I	L	G	I	D	V	G	G	T	S	V	K	F	G	L	V	T	P	E	G	E	I	Q	N	A	T	R	F	X	T	A	D	W	V	N	G	I	G	F	V	E	S	X	K	L	E	I	G	N	F	L	K	Q	Y	P	I	V	K	G	V	G	I	G	W	P	G	L	V	S	L	D	R	T	K	V	I	L	L	P	N
Template Known Secondary structure									S	S									T	T																T	T	T																		T	T									S	S				T	T	S						B	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		V	P	A	A	S	G	K	P	L	R	A	D	L	S	A	R	L	.	D	R	D	V	R	L	D	N	D	A	N	C	F	A	L	S	E	A	W	D	D	E	F	T	Q	Y	P	L	V	M	G	L	I	L	G	T	G	V	G	G	G	L	I	F	N	G	K	P	I	T	G	K	S	Y	I	T	G	E	F	G	H	M
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		I	P	S	V	V	N	V	P	I	V	E	I	L	R	S	E	F	P	H	I	H	F	K	I	E	N	D	A	K	C	A	A	L	G	E	Y	Y	F	G	E	N	K	R	X	Q	T	F	I	L	L	A	L	G	T	G	V	G	S	G	V	X	X	N	G	K	L	F	I	G	G	R	G	N	G	T	E	V	G	H	X
Template Known Secondary structure		B					S												T	T	S																			S	T	T	T	T		S	S							S	S	S								T	T						T	T	S					G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		R	L	P	V	D	A	L	T	M	M	G	L	D	F	P	L	R	R	C	G	C	G	Q	H	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	H	Y	Y	.	.	.	H	Q	P	L	Q	A	P	E	I	I	A	L	Y	D	Q	G	D	E	Q	A	R	A	H	V	E	R	Y	L	D	L	L	A	V
Query Conservation																																														.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	T	R	G	K	.	.	.	.	.	.	.	.	.	.	S	L	E	N	Q	V	G	I	N	H	L	I	A	Y	T	H	E	Q	L	A	L	D	V	A	K	K	S	S	L	H	T	I	A	E	L	S	P	K	V	I	A	D	H	A	A	Q	G	D	A	L	A	L	A	V	W	A	D	I	G	T	I	I	G	E
Template Known Secondary structure		B		T	T	S	S	.	.	.	.	.	.	.	.	.	.	B	S					S																T	T				S	G	G	G		S	S												T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.											.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																								.																					.
Query SS confidence																								.																					.
Query Sequence		C	L	G	N	I	L	T	I	V	D	P	D	L	V	V	I	G	G	G	L	S	N	.	F	P	A	I	T	T	Q	L	A	D	R	L	P	R	H	L	L	P	V	A	.	R	V	P	R	I	E	R	A	R	H	G	D	A	G	G	M	R	G	A	A	F	L	H	L	T
Query Conservation																								.																					.
Alig confidence																								.																					.
Template Conservation
Template Sequence		S	L	V	N	I	V	R	V	X	D	L	N	N	I	L	L	G	G	G	I	S	G	A	F	D	Y	F	V	P	N	L	K	K	A	X	L	E	H	L	P	T	Y	Y	T	D	D	X	Y	I	G	K	A	T	L	E	N	D	A	G	L	L	G	A	A	G	L	I	X	E
Template Known Secondary structure																			S	G	G	G	G	G																S						T	T							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions