Job Description P75959 Confidence 96.56% Date Thu Jan 5 12:16:28 GMT 2012 Rank 116 Aligned Residues 259 % Identity 19% Template c3d2fC_ PDB info PDB header:chaperone Chain: C: PDB Molecule:heat shock protein homolog sse1; PDBTitle: crystal structure of a complex of sse1p and hsp70 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.												.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	.	.	.	.	.	.	.	.	.	.	.	D	S	G	R	Q	L	Q	W	E	K	R	V	P	T	P	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	F	G	L	D	L	G	N	N	N	S	V	L	A	V	A	R	N	R	G	I	D	I	V	V	N	E	V	S	N	R	S	T	P	S	V	V	G	F	G	P	K	N	R	Y	L	G	E	T	G	K	N	K	Q	T	S	N	I	K	N	T	V	A	N	L	K	R	I	I	G	L	D	Y	H	H	P	D	F	E
Template Known Secondary structure										S	S									T	T								T	T			S	S									S	S	S				T							T	T	T		G	G	G									T	T		B	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																																	35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	D	A	F	L	D	A	V	C	E	L	V	A	E	A	D	Q	R	F	.	.	G	C	K	G	S	V	G	I	G	I	P	G	M	P	E	T	E	D	G	T	L	Y	A	A	N	V	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.																						.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		Q	E	S	K	H	F	T	S	K	L	V	E	L	D	D	K	K	T	G	A	E	V	R	F	A	G	E	K	H	V	F	S	A	T	Q	L	A	A	M	F	I	D	K	V	K	D	T	V	K	Q	D	T	K	A	N	I	T	D	V	C	I	A	V	P	P	W	Y	T	E	E	Q	R	Y	N	.	.	.	.	.	.
Template Known Secondary structure					T	T			S						T	T	S	B								T	T																												S											T	T									.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		A	A	S	G	K	P	L	R	A	D	L	S	A	R	L	D	R	D	V	R	L	D	N	D	A	N	C	F	A	L	S	E	A	W	D	D	E	F	.	.	.	T	Q	Y	P	L	V	M	G	L	I	L	G	T	G	V	G	G	G	L	I	F	N	G	K	P	I	T	G	K	S	Y	I	T	G	E	F	G	H	M
Query Conservation																																								.	.	.
Alig confidence		.	.	.	.	.	.																																	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	I	A	D	A	A	R	I	A	G	L	N	P	V	R	I	V	N	D	V	T	A	A	G	V	S	Y	G	I	F	K	T	D	L	P	E	G	E	E	K	P	R	I	V	A	F	V	D	I	G	H	S	S	Y	T	C	S	I	M	A	F	K	K	G	Q	L	K	V	L	G	T	A	C	D	K
Template Known Secondary structure		.	.	.	.	.	.								T	T																											S	S	S												S	S											T	T											T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	P	V	D	A	L	T	M	M	G	L	D	F	P	L	R	R	C	G	C	G	Q	H	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	H	Y	Y	H	Q	P	L	Q	A	P	E	I	I	A	L	Y	D	Q	G	D	E	Q	A	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	F	G	G	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	L	A	I	T	E	H	F	A	D	E	F	K	T	K	Y	K	I	D	I	R	E	N	P	K	A	Y	N	R	I	L	T	A	A	E	K	L	K	K	V	L	S	A	N	T	N	A	P	F	S	V	E	S
Template Known Secondary structure		T		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	S			G	G	G																							S							S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.																					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
																				225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	E	R	Y	L	D	L	L	A	V	C	L	G	N	I	L	T	I	V	D	.	.	.	.	.	P	D	L	V	V	I	G	G	G	L	S	N	F	P	A	I	T	T	Q	L	A	D	R	L	P	R	H	L	L	P	V	A	R	V	P	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		V	M	N	D	V	D	V	S	S	Q	L	S	R	E	E	L	E	E	L	V	K	P	L	L	E	R	V	T	E	P	V	T	K	A	L	A	Q	A	K	L	S	A	E	E	V	D	F	V	E	I	I	G	G	T	T	R	I	P	T	L	K	Q	S	I	S	E	A	F	G	K	P	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S	S																T					T	T	T	T										T	T			G	G	G								S	G	G	G	G	S												T	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R	A	R	H	G	D	A	G	G	M	R	G	A	A	F	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	T	T	L	N	Q	D	E	A	I	A	K	G	A	A	F	I	C
Template Known Secondary structure						S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions