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Job DescriptionP75959
Confidence97.34%DateThu Jan 5 12:16:28 GMT 2012
Rank110Aligned Residues255
% Identity19%Templatec2v7zA_
PDB info PDB header:chaperoneChain: A: PDB Molecule:heat shock cognate 71 kda protein; PDBTitle: crystal structure of the 70-kda heat shock cognate protein2 from rattus norvegicus in post-atp hydrolysis state
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.... .....30.
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Query Sequence  YGFDIGGTKIALGVFDSGRQLQ. . . . . WEKRVPT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSD
Template Known Secondary structure 

SSTT


SSS
S


SS
STTTS
TT

TTTTT

TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   32.......40.........50.........60.........70.........80..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PRDSYDAFLDAVCELVAEADQRFGCKGSVGIGIPGMPETEDGTLYAANVPA
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Template Sequence  MKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTV. . . . . . . . . . . . . . PAYFND
Template Known Secondary structure  TTS
SSTT

TTS

TS


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TT

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   87..90.........100.........110.........120.........130.........140...... ...150..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  ASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRLPV
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Template Sequence  SQRQAAKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVRAERNVLIFDLGGGTFDVSILTT. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
TTTTS

SS

SS
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   153......160.........170.........180.........190.........200.........210..
 
   163......170.........180.........190.........200.........210.........220.
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Query Sequence  DALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQ. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . EDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGI
Template Known Secondary structure  .TT

TT
ST


SS

STT
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   213......220.........230.........240.........250.........260.........270.........280.........290.
 
   222.......230.........240..... ....250.........260.........270.........280......
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Query Sequence  . . . . . . . . . . ARAHVERYLDLLAVCLGNILTIVD. . . . . PDLVVIGGGLSNFPAITTQLADRLPRHLLPVARVPRIERAR
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Template Conservation       
       
       
   
   
         
  


 

 
    
   
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Template Sequence  DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN. . . . . . . . GKELNKSI
Template Known Secondary structure  STTT

GGG
SSGGGG
TT........T


B

S
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   292.......300.........310.........320.........330.........340.........350..... ....360...
 
   287..290.........300
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Query Sequence  HGDAGGMRGAAFLH
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Template Sequence  NPDEAVAYGAAVQA
Template Known Secondary structure 
TTT
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   364.....370.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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