Job Description P75959 Confidence 86.60% Date Thu Jan 5 12:16:28 GMT 2012 Rank 153 Aligned Residues 195 % Identity 16% Template c2f9tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:pantothenate kinase; PDBTitle: structure of the type iii coaa from pseudomonas aeruginosa Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	D	S	G	R	Q	L	Q	W	E	K	R	V	P	T	P	R	D	S	Y	D	A	F	L	D	A	V	C	E	L	V	A	E	A	D	Q	R	F	G	C	K	G	S	V	G	I	G	I	P	G	M	P	E	T	E	D	G	T	L	Y	A	A	N	V	P
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		I	L	E	L	D	C	G	N	S	L	I	K	W	R	V	I	E	G	A	A	R	S	V	A	G	G	L	A	E	S	D	D	A	L	V	E	Q	L	T	S	.	.	.	.	.	.	.	.	.	Q	Q	A	L	P	V	R	A	C	R	L	V	S	V	R	S	E	Q	E	T	S	Q	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S									T	T	T									S	S	S					T	T	T	T	S	.	.	.	.	.	.	.	.	.	S														S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	S	G	K	P	L	R	A	D	L	S	A	R	L	D	R	D	V	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	A	N	C	F	A	L	S	E	A	W	D	D	E	F	T	Q	Y	P	L	V	M	G	L	I	L	G	T	G	V	G	G	G	L	I	F	N
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation		.	.	.	.	.	.																																																.	.	.	.
Template Sequence		.	.	.	.	.	.	L	V	A	R	L	E	Q	L	F	P	V	S	A	L	V	A	S	S	G	K	Q	L	A	G	V	R	N	G	Y	L	D	Y	Q	R	L	G	L	D	R	W	L	A	L	V	A	A	H	.	.	.	.	H	L	A	K	K	A	C	L	V	I	D	L	G	T	A	V	T	S	D	L	V	A	A
Template Known Secondary structure		.	.	.	.	.	.							T	T	S	S										S			T	T					S	S	S	G	G	G	S													.	.	.	.				S	S								S	S									T
Template Predicted Secondary structure		.	.	.	.	.	.																																																.	.	.	.
Template SS confidence
								64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		G	K	P	I	T	G	K	S	Y	I	T	G	E	F	G	H	M	R	L	P	V	D	A	L	T	M	M	G	L	D	F	P	L	R	R	C	G	C	G	Q	H	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	H	Y	Y	H	Q	P	L	Q	A	P	E	I	I	A	.	.	.	.	L	Y	D	Q
Query Conservation																																																																										.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	V	H	L	G	G	Y	I	C	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	T	L	X	R	S	Q	L	R	T	H	T	R	R	I	R	Y	D	D	A	E	A	R	R	A	L	A	S	L	Q	P	G	Q	A	T
Template Known Secondary structure		T	S	B										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T												T	T			S			S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.																																		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		G	D	E	Q	A	R	A	H	V	E	R	Y	L	D	L	L	A	V	C	L	G	N	I	L	T	I	V	D	P	D	L	.	V	V	I	G	G	G	L	S	N
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		A	E	A	V	E	R	G	C	L	L	X	L	R	G	F	V	R	E	Q	Y	A	X	A	C	E	L	L	G	P	D	C	E	I	F	L	T	G	G	D	A	E
Template Known Secondary structure																												T		T	T							S	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions