Job Description P75959 Confidence 99.81% Date Thu Jan 5 12:16:28 GMT 2012 Rank 40 Aligned Residues 256 % Identity 18% Template c1zbsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pg1100; PDBTitle: crystal structure of the putative n-acetylglucosamine kinase (pg1100)2 from porphyromonas gingivalis, northeast structural genomics target3 pgr18 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																							.
Query SS confidence																																			.	.																							.
Query Sequence		M	Y	Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	D	S	G	R	Q	L	Q	W	E	K	R	V	P	T	P	R	.	.	D	S	Y	D	A	F	L	D	A	V	C	E	L	V	A	E	A	D	Q	R	F	G	.	C	K	G	S	V	G	I	G	I	P	G	M	P	E	T	E	D	G	T	L	Y	A
Query Conservation																																			.	.																							.
Alig confidence																																			.	.																							.																		.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		X	I	L	I	G	D	S	G	S	T	K	T	D	W	C	I	A	K	E	G	K	S	L	G	R	F	Q	T	S	G	I	N	P	F	Q	Q	D	R	N	E	I	D	T	A	L	R	S	E	V	L	P	A	I	G	Q	K	A	S	S	I	R	A	V	Y	F	Y	G	A	G	C	T	P	A	K	A	.	.	.	.	.
Template Known Secondary structure										S	S									T	T													T	T	T	S										T	T	T	T					T	T	S	T	T	T									T	T			T	T	T		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		A	N	V	P	A	A	S	G	K	P	L	R	A	D	L	S	A	R	L	D	.	.	R	D	V	R	L	D	N	D	A	N	C	F	A	L	S	E	A	W	D	D	E	F	T	Q	Y	P	L	V	M	G	L	I	L	G	T	G	V	G	G	G	L	I	F	N	G	K	P	I	T	G	K	S	Y	I	T	G	E	F
Query Conservation																						.	.
Alig confidence		.	.	.	.	.	.	.	.													.	.																.	.	.	.	.	.																.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																														.	.	.	.	.	.																.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	P	X	L	N	E	A	L	D	S	X	L	P	H	C	D	R	I	E	V	A	G	D	X	L	G	A	A	R	A	.	.	.	.	.	.	L	C	G	D	S	E	G	I	A	C	I	L	G	T	G	.	.	.	.	S	N	S	C	L	F	D	G	R	E	I	K	A	N	V	S	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.											S	T	T		S															.	.	.	.	.	.		T	T	T	S								S	S	S	.	.	.	.								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																														.	.	.	.	.	.																.	.	.	.
Template SS confidence
										76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																												.	.	.	.	.
Query SS confidence																			.	.	.	.																																												.	.	.	.	.
Query Sequence		G	H	M	R	L	P	V	D	A	L	T	M	M	G	L	D	F	.	.	.	.	P	L	R	R	C	G	C	G	Q	H	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	H	Y	Y	H	Q	P	L	Q	A	P	E	I	I	A	L	Y	.	.	.	.	.	D	Q	G	D	E	Q	A	R	A	H	V
Query Conservation																			.	.	.	.																																												.	.	.	.	.
Alig confidence																			.	.	.	.																				.																								.	.	.	.	.
Template Conservation																																										.
Template Sequence		G	Y	I	L	G	D	E	G	S	G	A	V	L	G	R	L	F	I	G	S	L	L	K	G	Q	X	P	E	G	L	C	E	A	F	L	Q	E	Y	G	L	.	T	S	A	D	I	I	E	S	V	Y	R	K	P	F	P	N	R	F	L	A	G	F	S	P	F	I	A	Q	H	L	D	I	P	A	V	Y	S	L	V
Template Known Secondary structure								T	T	S														T	T		S		T	T									T	T		.												S	S								T	T						T	T	T	T	S
Template Predicted Secondary structure																																										.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Y	L	D	L	L	A	V	C	L	G	N	I	L	T	I	V	D	P	D	L	V	V	I	G	G	G	L	S	N	F	P	A	I	T	T	Q	L	A	D	R	L	P	R	H	L	L	P	V	A	R	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	S	F	D	D	F	L	V	R	N	V	L	R	Y	N	R	P	D	L	P	L	H	F	I	G	S	V	A	F	H	Y	R	E	V	L	S	S	V	I	K	K	R	G	L	T	L	G	S	V	L	Q	S	P
Template Known Secondary structure													T	G	G	G			T	T	S						S						T											T	T								S		S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions