Job Description P75959 Confidence 98.98% Date Thu Jan 5 12:16:28 GMT 2012 Rank 60 Aligned Residues 265 % Identity 14% Template c1x3nA_ PDB info PDB header:transferase Chain: A: PDB Molecule:propionate kinase; PDBTitle: crystal structure of amppnp bound propionate kinase (tdcd) from2 salmonella typhimurium Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.																			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	D	.	S	G	R	Q	L	Q	W	E	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	T	P	R	D	S	Y	D	A	F	L	D	A	V	C	E	L	V	A	E	A	D	Q	R	F	G	C	K	G	S	V	G
Query Conservation																				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																																									.
Template Sequence		V	V	L	V	I	N	C	G	S	S	S	I	K	F	S	V	L	D	V	A	T	C	D	V	L	M	A	G	I	A	D	G	M	N	T	E	N	A	F	L	S	I	N	G	D	K	P	I	N	L	A	H	S	N	Y	E	D	A	L	K	A	I	A	F	E	L	E	K	R	D	L	.	T	D	S	V	A	L	I	G
Template Known Secondary structure										S	S									T	T	T											S	T	T	S	S	S					S	T	T	S						S	S																T	T	T		.	T	T	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.
				62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.																																															.	.	.	.	90	.	.	.
Predicted Secondary structure		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	I	G	I	P	G	M	P	E	T	E	D	G	T	L	Y	A	A	N	V	P	A	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	L	R	A	D	L	S
Query Conservation		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	R	I	A	H	G	G	E	L	F	T	Q	S	V	I	I	T	D	E	I	I	D	N	I	R	R	V	S	P	L	A	P	L	H	N	Y	A	N	L	S	G	I	D	A	A	R	H	L	F	P	A	V	R	Q	V	A	V	F	D	T	S	F	H	Q	T	L	A	P	E	A	Y	L	Y	G	L	P	W	E	Y	F
Template Known Secondary structure					S			T	T	T		S	S																G	G	G	S																			T	T	S							T	T	G	G	G	G	G									S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		A	R	L	D	R	D	V	R	L	D	N	D	A	N	C	F	A	L	S	E	A	W	.	.	.	D	D	E	F	T	Q	Y	P	L	V	M	G	L	I	L	G	T	G	V	G	G	G	L	I	F	N	G	K	P	I	T	G	K	S	Y	I	T	G	E	F	G	H	M	R	L	P	V	D	A	L	T	M	M	G	L
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		S	S	L	G	V	R	R	Y	G	F	H	G	T	S	H	R	Y	V	S	R	R	A	Y	E	L	L	D	L	D	E	K	D	S	G	L	I	V	A	H	L	G	N	G	A	S	I	C	A	V	R	N	G	Q	S	V	D	T	S	M	G	M	T	P	L	E	G	L	M	M	G	T	R	S	G	D	V	D	F	G	A
Template Known Secondary structure			T	T							S																T	T		B	T	T	B									S	S	S								T	T						S			S	S	T	T	S	S	S			S	S				S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		D	F	P	L	R	R	C	G	C	G	Q	H	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	H	Y	Y	H	Q	P	L	Q	A	P	E	I	I	A	L	Y	D	Q	G	D	E	Q	A	R	A	H	V	E	R	Y	L	D	L	L	A	V	C	L	G	N	I	L	T	I	V	D	.	P	D	L	V
Query Conservation																																																																													.
Alig confidence																														.	.	.																																													.
Template Conservation																														.	.	.
Template Sequence		M	A	W	I	A	K	E	T	G	Q	T	L	S	D	L	E	R	V	V	N	K	E	S	G	L	L	G	I	.	.	.	S	G	L	S	S	D	L	R	V	L	E	K	A	W	H	E	G	H	E	R	A	R	L	A	I	K	T	F	V	H	R	I	A	R	H	I	A	G	H	A	A	S	L	H	R	L	D	G	I
Template Known Secondary structure										T													S							.	.	.		S	S		S											T	T																								T	T		S	S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		V	I	G	G	G	L	S	.	N	F	P	A	I	T	T	Q	L	A	D	R	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		I	F	T	G	G	I	G	E	N	S	V	L	I	R	Q	L	V	I	E	H	L
Template Known Secondary structure																					T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions