Return to main results Retrieve Phyre Job Id

Job DescriptionP75959
Confidence100.00%DateThu Jan 5 12:16:28 GMT 2012
Rank16Aligned Residues241
% Identity29%Templatec1woqB_
PDB info PDB header:transferaseChain: B: PDB Molecule:inorganic polyphosphate/atp-glucomannokinase; PDBTitle: crystal structure of inorganic polyphosphate/atp-glucomannokinase from2 arthrobacter sp. strain km at 1.8 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30. ........40.........50..... ....60.........70.....
Predicted Secondary structure 






..

.





...








Query SS confidence 






















. .






.























. . .



















Query Sequence  YYGFDIGGTKIALGVFDSGRQLQ. . WEKRVPT. PRDSYDAFLDAVCELVAEADQRFG. . . CKGSVGIGIPGMPETEDGTL
Query Conservation   



 


     
 
  
 
 ..       .           
   
        ...    
 
   
      
  
Alig confidence 






















..






.























...



















Template Conservation 






 
 
   
 
  
  
                     
   
               
 
             
Template Sequence  LIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEAPAAGSPVGVTFPGIIQHGVVHS
Template Known Secondary structure 
SSTTTTSS



SS

TSTT


TT

SS
TT

Template Predicted Secondary structure 


























Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   76...80.........90.........100.........110.........120.... .....130.........140.........150....
Predicted Secondary structure 






















.

















Query SS confidence 
















































.





























Query Sequence  YAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPL. VMGLILGTGVGGGLIFNGKPITGKSYITGE
Query Conservation                         

 
 

  
 
 

   
       .   
  
 


 
 
  
    
     

Alig confidence 
















































.






















.....

Template Conservation         
    
   
      

 
 

    

 
   
           
    


 
 
  
    
.....

Template Sequence  AANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYGAGAGVKGTVLVITLGTGIGSAFIFDGKLVPN. . . . . AE
Template Known Secondary structure 
TTS
GGGTT
BTS
STTTT

SSSSTTTT.....

Template Predicted Secondary structure 






























.....
Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160...... ..
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  FGHMRLPVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLA
Query Conservation   
                       
     
   
                           

  
  
       
 
Alig confidence 









..........











...................................












Template Conservation 


  
    ..........            ...................................     
     
 
Template Sequence  LGHLEIDGHD. . . . . . . . . . AETKASAVARER. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGLSWDEYSVLLQ
Template Known Secondary structure  GGG
TT..........S...................................TT

Template Predicted Secondary structure 



..........





...................................
Template SS confidence 















































































   169170........ .180.........190 .........200...
 
   235....240.........250.........260.........270.........280.........290....... ..300..
Predicted Secondary structure 

















.
Query SS confidence 






























































.




Query Sequence  VCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPVARVPRIERARHGDAGGMRGAA. FLHLT
Query Conservation    
  
   
 
  


 
 
         
   
            
  
         


. 


 
Alig confidence 



























..........
























.




Template Conservation    
  
   



 




 
       ..........   
     
  
 

  
   


      
Template Sequence  RYFSHVEFLFSPELFIVGGGISKRADEY. . . . . . . . . . LPNLRLRTPIVPAVLRNEAGIVGAAIEIALQ
Template Known Secondary structure 

SSTTGGGGGGT..........GGG


SS

TTGGG
Template Predicted Secondary structure 




..........







Template SS confidence 




































































   204.....210.........220.........230. ........240.........250.........260..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions