Job Description P75959 Confidence 99.80% Date Thu Jan 5 12:16:28 GMT 2012 Rank 41 Aligned Residues 287 % Identity 17% Template c1v4sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucokinase isoform 2; PDBTitle: crystal structure of human glucokinase Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.								.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.														.	.	.	.																							.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.														.	.	.	.																							.	.	.	.	.
Query Sequence		Y	Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	D	S	G	R	.	.	.	.	.	.	.	Q	L	Q	W	E	K	R	V	P	T	P	R	D	.	.	.	.	S	Y	D	A	F	L	D	A	V	C	E	L	V	A	E	A	D	Q	R	F	G	C	.	.	.	.	.	K	G	S	V	G	I	G	I	P
Query Conservation																						.	.	.	.	.	.	.														.	.	.	.																							.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.														.	.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		F	L	S	L	D	L	G	G	T	N	F	R	V	M	L	V	K	V	G	E	G	E	E	G	Q	W	S	V	K	T	K	H	Q	M	Y	S	I	P	E	D	A	M	T	G	T	A	E	M	L	F	D	Y	I	S	E	C	I	S	D	F	L	D	K	H	Q	M	K	H	K	K	L	P	L	G	F	T	F	S	F	P
Template Known Secondary structure								S	S	S													S	S	S															S	T	T	T	S	S	B																		T	T	T		T	T											S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
			66	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.															.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence		.															.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		.	G	M	P	E	T	E	D	G	T	L	Y	A	A	N	.	.	.	.	V	P	A	A	S	G	K	P	L	R	A	D	L	S	A	R	L	D	R	D	.	.	.	.	.	.	.	V	R	L	D	N	D	A	N	C	F	A	L	S	E	A	W	D	D	E	F	T	Q	Y	P	L	V	M	G	L	I	L	G	T	G
Query Conservation		.															.	.	.	.																					.	.	.	.	.	.	.
Alig confidence		.															.	.	.	.																					.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		V	R	H	E	D	I	D	K	G	I	L	L	N	W	T	K	G	F	K	A	S	G	A	E	G	N	N	V	V	G	L	L	R	D	A	I	K	R	R	G	D	F	E	M	D	V	V	A	M	V	N	D	T	V	A	T	M	I	S	C	Y	Y	.	.	.	.	E	D	H	Q	C	E	V	G	M	I	V	G	T	G
Template Known Secondary structure							T	T									T	T				B	T		T	T	S	B										T	T	T		S																					T	.	.	.	.	T		T	T								S	S	S
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.							.	.	.	.	.																																									.	.	.
Query SS confidence																						.	.	.	.	.	.							.	.	.	.	.																																									.	.	.
Query Sequence		V	G	G	G	L	I	F	N	G	K	P	I	T	G	K	S	Y	I	T	G	.	.	.	.	.	.	E	F	G	H	M	R	.	.	.	.	.	L	P	V	D	A	L	T	M	M	G	L	D	F	P	L	R	R	C	G	C	G	Q	H	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	.	.	.
Query Conservation																						.	.	.	.	.	.							.	.	.	.	.																																									.	.	.
Alig confidence																						.	.	.	.	.	.							.	.	.	.	.																				.	.	.																			.	.	.
Template Conservation																																																										.	.	.
Template Sequence		C	N	A	C	Y	M	E	E	M	Q	N	V	E	L	V	E	G	D	E	G	R	M	C	V	N	T	E	W	G	A	F	G	D	S	G	E	L	D	E	F	L	L	E	Y	D	R	L	V	D	E	S	S	A	N	P	G	.	.	.	Q	Q	L	Y	E	K	L	I	G	G	K	Y	M	G	E	L	V	R	L	V	L
Template Known Secondary structure										G	G	G		T	T	S	S			S	S								G	G	G	T	T	T	T	S	T	T	T	T	T											T	S	S	S	T	T	.	.	.	S									T	T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
																			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																										.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	Y	H	Q	P	L	Q	A	P	E	I	I	A	L	Y	D	Q	G	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	R	A	H	V	E	R	Y	L	D	L	L	A	V	C	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	L	V	D	E	N	L	L	F	H	G	E	A	S	E	Q	L	R	T	R	G	A	F	E	T	R	F	V	S	Q	V	E	S	D	T	G	D	R	K	Q	I	Y	N	I	L	S	T	L	G	L	R	P	S	T	T	D	C	D	I	V	R	R	A	C	E	S	V	S	T	R	A	A	H	M	C	S	A	G	L
Template Known Secondary structure							T	T		S	G	G	G				T	G	G	G	S	T	T		S									T	T			S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.									.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure												.	.	.	.	.	.	.	.											.
Query SS confidence												.	.	.	.	.	.	.	.											.
Query Sequence		G	N	I	L	T	I	V	D	P	D	.	.	.	.	.	.	.	.	L	V	V	I	G	G	G	L	S	N	.	F	P	A	I	T	T	Q	L	A	D	R	L	P	R	H	L	L	P	V	A	R	V	P	R	I	E	R	A	R	H	G	D	A	G	G	M	R	G	A	A	F	L	H
Query Conservation												.	.	.	.	.	.	.	.											.
Alig confidence												.	.	.	.	.	.	.	.											.																	.	.											.	.	.
Template Conservation																																															.	.											.	.	.
Template Sequence		A	G	V	I	N	R	M	R	E	S	R	S	E	D	V	M	R	I	T	V	G	V	D	G	S	V	Y	K	L	H	P	S	F	K	E	R	F	H	A	S	V	R	R	L	T	.	.	P	S	C	E	I	T	F	I	E	S	.	.	.	E	E	G	S	G	R	G	A	A	L	V	S
Template Known Secondary structure										T	T			S	S	S															S	T	T														.	.	T	T									.	.	.	S	S
Template Predicted Secondary structure																																															.	.											.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.				.	.	.	.	.	.	.	.	450	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions