Job Description P75959 Confidence 98.05% Date Thu Jan 5 12:16:28 GMT 2012 Rank 93 Aligned Residues 270 % Identity 14% Template c1o1f4_ PDB info PDB header:contractile protein Chain: 4: PDB Molecule:skeletal muscle actin; PDBTitle: molecular models of averaged rigor crossbridges from2 tomograms of insect flight muscle Resolution 70.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.																																					.	.	.	.	.	40	.	.	.	.
Predicted Secondary structure																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	D	S	G	R	.	.	Q	L	Q	W	E	K	R	V	P	T	P	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	D	A	F	L	D	A	V	C
Query Conservation																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	C	D	N	G	S	G	L	V	K	A	G	F	A	G	D	D	A	P	R	A	V	F	P	S	I	V	G	R	P	R	H	Q	G	V	M	V	G	M	G	Q	K	D	S	Y	V	G	D	E	A	Q	S	K	R	G	I	L	T	L	K	Y	P	I	E	H	G	I	I	T	N	W	D	D	M	E	K	I	W	H
Template Known Secondary structure								S	S							T	T		S	S		S											S	S					T	T					S				T						T	G	G	G						S			T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		E	L	V	A	E	A	D	Q	R	F	G	C	K	G	S	V	G	I	G	I	P	G	M	P	E	T	E	D	G	T	L	Y	A	A	N	V	P	A	A	S	G	K	P	L	R	A	D	L	S	A	R	L	D	R	D	.	V	R	L	D	N	D	A	N	C	F	A	L	S	E	A	W	D	D	E	F	T	Q	Y	P
Query Conservation																																																									.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.													.														.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Sequence		H	T	F	Y	N	E	L	R	V	A	P	E	E	H	P	T	L	L	T	E	A	P	L	N	P	K	A	N	R	E	K	.	.	.	.	.	.	.	.	.	.	.	.	M	T	Q	I	M	F	E	T	F	N	V	P	A	M	Y	V	A	I	Q	A	V	L	S	L	Y	A	.	.	.	.	.	.	.	S	G	R	T
Template Known Secondary structure						T	T	T				G	G	G	S								T	T									.	.	.	.	.	.	.	.	.	.	.	.									T			S															.	.	.	.	.	.	.	T	S		S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.													.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.
		124	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	V	M	G	L	I	L	G	T	G	.	V	G	G	G	L	I	F	N	G	K	P	I	T	G	K	S	Y	I	T	G	E	F	G	H	M	R	L	P	V	D	A	L	T	M	M	G	L	D	F	P	L	R	R	C	G	C	G	Q	H	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	H	Y	Y
Query Conservation												.
Alig confidence												.																		.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		T	G	I	V	L	D	S	G	D	G	V	T	H	N	V	P	I	Y	E	G	Y	A	L	P	H	A	I	M	.	.	.	.	.	.	.	.	R	L	D	L	A	G	R	D	L	T	D	Y	L	M	K	I	L	T	E	R	G	Y	S	F	V	T	T	A	E	R	E	I	V	R	D	I	K	E	K	L	C	Y	V	A
Template Known Secondary structure		S								S	S									T	T				G	G	G			.	.	.	.	.	.	.	.																			T	T	T					S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.																.	.	220	.	.	.									.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.								.	250	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		H	Q	P	L	Q	A	P	E	I	I	A	L	Y	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	E	Q	A	R	.	.	.	.	.	.	.	.	A	H	V	E	R	Y	L	D	L	L	A	V	C	L	G	N	I	L	T	I	V	D	P	D	L	.	.	.	.	.	.	.	V	V	I	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	F	E	N	E	M	A	T	A	A	S	S	S	S	L	E	K	S	Y	E	L	P	D	G	Q	V	I	T	I	G	N	E	R	F	R	C	P	E	T	L	F	Q	P	S	F	I	G	M	E	S	A	G	I	H	E	T	T	Y	N	S	I	M	K	C	D	I	D	I	R	K	D	L	Y	A	N	N	V	M	S
Template Known Secondary structure		S	S	S												T	T							S	S	S						S	S					T	T						G	G	G	G	T			S												T	T	S		T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	S	N	F	P	A	I	T	T	Q	L	A	D	R	L	P	R	H	L	L	P	V	A	R	V	P	R	I	E	R	A	R	H	G	D	A	G	G	M	R	G	A	A	F	L	H
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		G	G	T	T	M	Y	P	G	I	A	D	R	M	Q	K	E	I	T	A	.	L	A	P	S	T	M	K	I	K	I	I	A	P	P	E	R	K	Y	S	V	W	I	G	G	S	I	L	A
Template Known Secondary structure		S	G	G	G	G	S	T	T											T	.	T	S		T	T	S								T	T	G	G	G
Template Predicted Secondary structure																					.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions