Job Description P0A7I4 Confidence 100.00% Date Thu Jan 5 11:05:43 GMT 2012 Rank 2 Aligned Residues 501 % Identity 62% Template c3tr5C_ PDB info PDB header:translation Chain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii Resolution 2.11 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	Q	E	V	A	K	R	R	T	F	A	I	I	S	H	P	D	A	G	K	T	T	I	T	E	K	V	L	L	F	G	Q	A	I	Q	T	A	G	T	V	K	G	R	G	S	N	Q	H	A	K	S	D	W	M	E	M	E	K	Q	R	G	I	S	I	T	T	S	V	M	Q	F	P	Y	H	D	C	L	V	N
Query Conservation
Alig confidence																																												.	.	.	.																				.	.	.	.
Template Conservation																																												.	.	.	.																				.	.	.	.
Template Sequence		V	E	K	Q	T	A	X	R	R	T	F	A	I	I	S	H	P	D	A	G	K	T	T	L	T	E	K	L	L	L	F	G	G	A	I	Q	L	A	G	T	I	K	.	.	.	.	S	R	H	A	T	S	D	W	X	E	L	E	K	Q	V	T	T	S	V	.	.	.	.	X	Q	F	P	Y	K	D	Y	L	I	N
Template Known Secondary structure								T										T	T	S	S													T									T	.	.	.	.												T	T				S	S		.	.	.	.						T	T
Template Predicted Secondary structure																																												.	.	.	.																				.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	T	P	G	H	E	D	F	S	E	D	T	Y	R	T	L	T	A	V	D	C	C	L	M	V	I	D	A	A	K	G	V	E	D	R	T	R	K	L	M	E	V	T	R	L	R	D	T	P	I	L	T	F	M	N	K	L	D	R	D	I	R	D	P	M	E	L	L	D	E	V	E	N	E	L	K	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	D	T	P	G	H	A	D	F	T	E	D	T	Y	R	T	L	T	A	V	D	S	A	L	X	V	I	D	A	A	K	G	V	E	P	R	T	I	K	L	X	E	V	C	R	L	R	H	T	P	I	X	T	F	I	N	K	X	D	R	D	T	R	P	S	I	E	L	L	D	E	I	E	S	I	L	R	I	H
Template Known Secondary structure								S	T	T									G	G	G		S								T	T	T	B	S													T	T	T										T	T	S																S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	P	I	T	W	P	I	G	C	G	K	L	F	K	G	V	Y	H	L	Y	K	D	E	T	Y	L	Y	Q	S	G	K	G	H	T	I	Q	E	V	R	I	V	K	G	L	N	N	P	D	L	D	A	A	V	G	E	D	L	A	Q	Q	L	R	D	E	L	E	L	V	K	G	A	S	N	E	F	D	K	E	L
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.
Template Sequence		C	A	P	V	T	W	P	I	G	X	G	K	Y	F	K	G	I	Y	H	L	I	E	D	A	I	Y	L	Y	Q	P	S	E	R	I	E	G	I	N	N	P	E	.	.	.	.	.	.	.	.	.	L	D	K	K	L	G	D	L	A	S	E	L	R	N	E	I	E	L	V	K	G	A	S	H	P	F	E	R	E	G
Template Known Secondary structure					S					S		T	T								T	T	T	T														T	T				.	.	.	.	.	.	.	.	.						T																	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	A	G	E	I	T	P	V	F	F	G	T	A	L	G	N	F	G	V	D	H	M	L	D	G	L	V	E	W	A	P	A	P	M	P	R	Q	T	D	T	R	T	V	E	A	S	E	D	K	F	T	G	F	V	F	K	I	Q	A	N	M	D	P	K	H	R	D	R	V	A	F	M	R	V	V	S	G	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	K	G	E	L	T	P	I	F	F	G	S	A	I	N	N	F	G	V	G	E	L	L	D	A	F	V	K	E	A	P	P	P	Q	G	R	E	T	N	S	R	L	V	K	P	E	E	E	K	F	S	G	F	V	F	K	I	Q	A	N	X	D	P	G	H	R	D	R	I	A	F	L	R	I	A	S	G	Q	Y
Template Known Secondary structure					T	S								B	G	G	G	T	B	S												S								B	S	S					T	T		S	S													S	T	T													S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	G	M	K	L	R	Q	V	R	T	A	K	D	V	V	I	S	D	A	L	T	F	M	A	G	D	R	S	H	V	E	E	A	Y	P	G	D	I	L	G	L	H	N	H	G	T	I	Q	I	G	D	T	F	T	Q	G	E	M	M	K	F	T	G	I	P	N	F	A	P	E	L	F	R	R	I	R	L	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	G	X	K	A	Y	H	V	R	L	K	K	E	I	Q	I	N	N	A	L	T	F	X	A	G	K	R	E	N	A	E	E	A	W	P	G	D	I	I	G	L	H	N	H	G	T	I	Q	I	G	D	T	F	T	Q	G	E	R	F	K	F	T	G	I	P	N	F	A	S	E	L	F	R	L	V	R	L	K	D
Template Known Secondary structure			T	T						G	G	G	T						S	S		B			B	T	T		S	S			S				T	T								S	S				T	T					S	S					B																	S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.		.	470	.	.	.	.	.	.	.	.					.	480
Predicted Secondary structure																																																																	.											.	.	.	.
Query SS confidence																																																																	.											.	.	.	.
Query Sequence		P	L	K	Q	K	Q	L	L	K	G	L	V	Q	L	S	E	E	G	A	V	Q	V	F	R	P	I	S	N	N	D	L	I	V	G	A	V	G	V	L	Q	F	D	V	V	V	A	R	L	K	S	E	Y	N	V	E	A	V	Y	E	S	V	N	V	.	A	T	A	R	W	V	E	C	A	D	.	.	.	.	A	K
Query Conservation																																																																	.											.	.	.	.
Alig confidence																																																																	.											.	.	.	.
Template Conservation
Template Sequence		P	L	K	Q	K	A	L	L	K	G	L	T	Q	L	S	E	E	G	A	T	Q	L	F	R	P	L	D	S	N	E	L	I	L	G	A	V	G	L	L	Q	F	D	V	V	A	Y	R	L	E	N	E	Y	N	V	K	C	V	Y	E	S	V	N	V	V	T	A	R	W	V	I	C	D	D	K	A	V	L	E	R	F
Template Known Secondary structure		G	G	G														T	T	S							T	T	S	S							S	S	T																								S										S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		481	.	.	.	.	.	.	.	.	490		.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		K	F	E	E	F	K	R	K	N	E	.	S	Q	L	A	L	D	G	G	D	N	L	A	Y	I	A	T	S	M	V	N	L	R	L	A	Q	E	R	Y	P	D	V	Q	F	H	Q	T	R	E	H
Query Conservation												.
Alig confidence												.									.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		N	Q	E	Q	S	R	N	L	A	Y	D	G	G	G	H	L	T	Y	L	.	.	.	.	.	.	A	P	S	R	V	N	L	E	I	T	X	E	K	W	P	E	I	Q	F	S	E	T	R	E	H
Template Known Secondary structure						G	G	G					T	T	S						.	.	.	.	.	.		S	S												T	T	S				S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500							.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.