Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7I4
Confidence98.68%DateThu Jan 5 11:05:43 GMT 2012
Rank172Aligned Residues121
% Identity11%Templatec3p1jB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of human gtpase imap family member 2 in the2 nucleotide-free state
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  TFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHED
Query Conservation 






   




 
 

   
 
   
 
           
    
 





             








 
Alig confidence 

































...................................










Template Conservation   
 


   







 
 
  
          ...................................    

 
   
Template Sequence  RIILVGKTGTGKSAAGNSILRKTLTKTCSKSQGE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IVIIDTPDMFS
Template Known Secondary structure  S
T




S


...................................

GGGG
Template Predicted Secondary structure 











...................................




Template SS confidence 















































































   24.....30.........40.........50....... ..60........
 
   95....100.........110.........120.........130..... ....140...... ...150....
Predicted Secondary structure  ...........










....




.....



Query SS confidence  . . . . . . . . . . .








































. . . .










. . . . .







Query Sequence  . . . . . . . . . . . FSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDT. . . . PILTFMNKLDR. . . . . DIRDPMEL
Query Conservation  ...........
  

  

   
 






  

   
            ....
 







 .....  

    
Alig confidence  ...........








































....










.....







Template Conservation                                                            


  
 
              
Template Sequence  WKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGHTIVLFTHNGGSLMDYMHDSDNKA
Template Known Secondary structure  SS


TT

STT



GGGGGG




Template Predicted Secondary structure 





























Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   155....160.........170
Predicted Secondary structure 


Query SS confidence 















Query Sequence  LDEVENELKIGCAPIT
Query Conservation 
  
   
        
Alig confidence 















Template Conservation 
              
Template Sequence  LSKLVAACGGRICAFN
Template Known Secondary structure  TTT

Template Predicted Secondary structure 


Template SS confidence 















   168.170.........180...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions